Gene detail information of Glyur001903s00041290 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G05940.1 | 1.00E-36 | Protein kinase superfamily protein |
| NR | KHN12282.1 | 9.74E-45 | Serine/threonine-protein kinase [Glycine soja] |
| Swissprot | tr|Q9CAH1|Y1725_ARATH | 2.00E-24 | Putative receptor-like protein kinase At1g72540 |
| trEMBL | tr|V7AZF4|V7AZF4_PHAVU | 5.00E-45 | Uncharacterized protein {ECO:0000313|EMBL:ESW10650.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01903 | 11248 | 12249 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.970 |
| SRR1783600 | control | 1.208 |
| SRR1783602 | moderate drought stress | 1.146 |
| SRR1811619 | moderate drought stress | 1.487 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.315 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.308 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.071 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.625 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.288 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.046 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.844 |
| SRR2868004 | Drought Stress (root) | 15.562 |
| SRR2967015 | Control (root) | 16.709 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.701 |
| SRR9715740 | Leaf | 9.326 |
| SRR9715741 | Leaf | 15.426 |
| SRR9715739 | Root | 2.670 |
| SRR9715742 | Root | 13.975 |
| SRR9715743 | Root | 11.046 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 21.872 |
| SRR8749028 | MeJA induced 9h | 78.497 |
| SRR8749029 | MeJA induced 9h | 58.620 |
| SRR8749030 | Uninduced | 8.696 |
| SRR8749031 | Uninduced | 19.453 |
| SRR8749032 | Uninduced | 26.882 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.141 |
| SRR8400027 | Control - Root | 8.897 |