Gene detail information of Glyur001897s00039958.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G54500.1 | 9.00E-61 | flavodoxin-like quinone reductase 1 |
| NR | XP_003540116.1 | 4.14E-78 | PREDICTED: minor allergen Alt a 7-like [Glycine max] |
| COG | YP_004604052.1 | 1.00E-28 | flavoprotein WrbA [Flexistipes sinusarabici DSM 4947] |
| Swissprot | tr|Q9LSQ5|FQR1_ARATH | 1.00E-75 | NAD(P)H dehydrogenase (quinone) FQR1 {ECO:0000305} |
| trEMBL | tr|I1LT63|I1LT63_SOYBN | 2.00E-78 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G25950.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01897 | 36258 | 37441 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K03809 | wrbA | EC:1.6.5.2 | Ubiquinone and other terpenoid-quinone biosynthesis | map00130 |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.594 |
| SRR1783600 | control | 0.866 |
| SRR1783602 | moderate drought stress | 0.270 |
| SRR1811619 | moderate drought stress | 0.211 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.184 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.788 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.000 |
| SRR2868004 | Drought Stress (root) | 0.043 |
| SRR2967015 | Control (root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.105 |
| SRR9715743 | Root | 0.013 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.392 |
| SRR8749028 | MeJA induced 9h | 0.062 |
| SRR8749029 | MeJA induced 9h | 18.473 |
| SRR8749030 | Uninduced | 1.225 |
| SRR8749031 | Uninduced | 80.582 |
| SRR8749032 | Uninduced | 125.463 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.019 |
| SRR8400027 | Control - Root | 0.016 |