Gene detail information of Glyur001895s00033541 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G08600.1 | 4.00E-54 | Protein of unknown function (DUF1191) |
| NR | XP_004500399.1 | 7.87E-166 | PREDICTED: uncharacterized protein LOC101515021 [Cicer arietinum] |
| trEMBL | tr|I1LLZ6|I1LLZ6_SOYBN | 1.00E-160 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G31550.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01895 | 37073 | 38035 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001895s00033541.1 | PF06697.7 | DUF1191 | 37 | 312 | 2.00E-87 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.002 |
| SRR1783600 | control | 4.025 |
| SRR1783602 | moderate drought stress | 0.433 |
| SRR1811619 | moderate drought stress | 0.381 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.737 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.858 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.881 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.997 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.578 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.665 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.010 |
| SRR2868004 | Drought Stress (root) | 2.071 |
| SRR2967015 | Control (root) | 2.555 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.175 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.148 |
| SRR9715739 | Root | 3.550 |
| SRR9715742 | Root | 0.367 |
| SRR9715743 | Root | 0.717 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.625 |
| SRR8749028 | MeJA induced 9h | 0.085 |
| SRR8749029 | MeJA induced 9h | 0.353 |
| SRR8749030 | Uninduced | 0.066 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.059 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.921 |
| SRR8400027 | Control - Root | 11.075 |