Gene detail

Gene detail information of Glyur001894s00031740.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G37670.2	0	N-acetyl-l-glutamate synthase 2
NR	XP_003550973.2	0	PREDICTED: probable amino-acid acetyltransferase NAGS1, chloroplastic-like isoform X1 [Glycine max]
COG	YP_008547671.1	2.00E-68	N-acetylglutamate synthase [Sulfuricella denitrificans skB26]
Swissprot	tr\|B5X4Z4\|NAGS2_ARATH	0	Probable amino-acid acetyltransferase NAGS2, chloroplastic (Precursor)
trEMBL	tr\|K7MLX9\|K7MLX9_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA17G17350.2}

Sequence

Transcript Sequence

>Glyur001894s00031740.1
ATGGCTACTTGTACTTGTAGTTCGAAGCCACCCATGTCATCATCAGTGAAATGCCGTGGAGAAGCTTGCATTCCACGTGGCCCTGCTTCATCATCTTATGGTTATGGTCGTCCAAGCGTGGTGGGAATGGGAAGGCTCGGTTGCAATTGTGCTTCCAGCTGGTTAGATATGAGGAAAACATCACAGTTTGTGGCGAGAGGCTGCTGCGGGTACGACCGTAGTAGTAGCGGTGGTGACAGTGATGAGGAATGGGAAGCAGATCAGGAGGAGCTCGTGAAGGTTCTCCTCGAAGTGAAGCCTTATTTGTCCGTACATTGCAAAAAAGTATTTGTTGTTGTCTTATCTGCAGAAATTGTTGAAAGTCCTTATTTGGATGCCACTCTCAAGGATACTACATACGATGAGAATGACTTGTTATCCAGTGGCAACAAAAGCAATGGCGGCTTGTTGAGTAGTGTTGTCAATCAATGTGATTTATGGAACTATCCCCGATTCTGTTGCAATAATCCTATGGCGGCTCTCTCATGGAGTTCTCGCATATCATCCCTTCCAAACCCTCCTCCCAAGTTGTTTTCTTCTCACCGATTCAAATTGAATTTCCACCCACAAGTAGTGGTAGATTTAACATCTTGGCCCTCAAAGTCAAAGTCAAATGATCCATCAGCCACGAGGAGGGGAATAATCCCAATCTCAACCACCTCAACCTCCAAACGCTGCAACGTGTTTTTCAGCGAAGAAGAGTTGAATGGGAGCAGCGCGGTGGTGGAAGAAGAGGAGAGNAGCCACAGCAACATGGACGATAAGCAATTCGATATAGCTTTCCTTCATCACCTGGGAATCCGGTTTGTTCTTGTTCCGGGGACCCATGTGCAAATTGACAATCTTTTGCGTGAGAGAGGGAGCCAGCCTAAGTATGTTGGTCCATATAGGATAACGGATGATGAATCTCTAGCAGCTGCAATGGAAGCAGCTGGGAGAATAAGACTGATGATGGAGGCAAAGCTTTCTCCTGGACCCTCCATTTGCAATATTCGTCGACATGGTGACAATAGCCGTTGGCATGAAGTTGGTGTCAGTGTTGCCAGTGGTAACTTTCTTGCAGCCAAGAGAAGAGGGGTTGTCAAAGGAATCGATTATGGGTCAACTGGGGAAGTTAAAAAAGTAGATGTTACTCGCATGCGTGAGAGGCTTGATGGTGGTTGTATAGTTATTTTAAGCAACTTGGGATANTCCAGCTCTGGAGAAGTATTAAATTGCAATACCTATGAAGTTGCAACAGCTTGTGCCTTAGCTATAGGAGCAGACAAGCTTATATGCATTATAGATGGTCCAATTCTTGATGAGAGCGGACACCTTGTCCGTTTCTTGCCTCTCCAAGAAGCAGACTTGCTAATTCGTAAACGGGTTGAGCAAAGTGAAACAGCTGCTAACTATGTCAAAGCTGTTGATGAAGAAGGTTTCAAATCTTTTGGGCATAACAATTTTAANGGGGCAATCCATTCTCAACAGAATGGGAAACCATTTTCAGAATGGCATAATGCAACCTTTCATAATGGTGTTGGTTTCGACAATGGTGAGCAGGGTTTTGCTATTGGAGGTCAGGAGTGGCTNAGTCGAATGAATGGTTACCTGTCAGAACTGGCCGCTGCAGCCTTTGTTTGCAGAGGTGGTGTTCAAAGAGTTCACTTATTGGATGGCACTATCAGTGGAGTTNTATTGTTGGAATTGTTCAAGAGAGATGGGATGGGAACAATGGTGGCTAGTGACCTTTACGAAGGCACCCGGATGGCTCGGCTGCTTCAATCGTTGAGTTCCTTCATTGTTGTGGAAAGAGAAGGTCAAATAATCGCTTGTGCTGCACTTTTTCCTTTCTTTGAGGAGAAATGTGGAGAGGTTGCTGCAATTGCAGTATCTCCTGATTGTCGAGGCCAGGGACAAGGAGACAAATTGCTTGATTATATAGAGAAGAAAGCATCATCTCTTGGGTTCGATATGCTTTTCTTGCTCACGACTCGTACGGCAGATTGGTTTGTGAGGCGTGGATTTTCAGAATGTTCAATTGATTCTATACCTGAGAAGAAAAGGAAATCGATTAATCTGTCCCGCAAGTCTAAGTATTACATGAAGAAGCTTCCACCTAATAAGAGTGGAATTACTGTTAGTAAGAAATTTTCTTCCTGTTAGCGCTACCTAATAAAGAGGGGATTGTGTCTTGTTTGGCACTTCAGTAGGCTGTAGGTAATAATCTCAATATATGGTTGCTGAAAAATCGGTA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01894	31407	38493	-

Gene family

Gene family	subfamily
Transcription Factors Family	GNAT

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K14682	argAB	EC:2.3.1.1	2-Oxocarboxylic acid metabolism	map01210
			Biosynthesis of amino acids	map01230
			Arginine biosynthesis	map00220

Gene Ontology

biological_process
GO:0006526 arginine biosynthetic process

cellular_component
GO:0005737 cytoplasm

molecular_function

GO:0004042 acetyl-CoA:L-glutamate N-acetyltransferase activity

GO:0008080 N-acetyltransferase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001894s00031740.1	PF00696.23	AA_kinase	271	466	1.80E-08
Glyur001894s00031740.1	PF00583.19	Acetyltransf_1	610	675	4.20E-11

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	4.228
SRR1783600	control	4.282
SRR1783602	moderate drought stress	6.319
SRR1811619	moderate drought stress	6.279

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	8.729
DRR006520	Root Summer glycyrrhizin high producing strain	8.188
DRR006521	Root Winter glycyrrhizin high producing strain	21.680
DRR006522	Root Winter glycyrrhizin high producing strain	21.053
DRR006523	Root Summer glycyrrhizin low producing strain	10.738
DRR006524	Root Summer glycyrrhizin low producing strain	11.099
DRR006525	Leaf Summer glycyrrhizin high producing strain	5.820
DRR006526	Leaf Summer glycyrrhizin high producing strain	5.941

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	11.683
SRR2868004	Drought Stress (root)	14.470
SRR2967015	Control (root)	16.076

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	8.148
SRR9715740	Leaf	7.000
SRR9715741	Leaf	12.124
SRR9715739	Root	4.266
SRR9715742	Root	6.816
SRR9715743	Root	5.257

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	7.311
SRR8749028	MeJA induced 9h	8.539
SRR8749029	MeJA induced 9h	7.569
SRR8749030	Uninduced	10.681
SRR8749031	Uninduced	10.227
SRR8749032	Uninduced	8.690

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	4.838
SRR8400027	Control - Root	5.284