Gene detail information of Glyur001886s00042917 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G31980.1 | 6.00E-26 | |
| NR | XP_007133919.1 | 0 | hypothetical protein PHAVU_010G003300g [Phaseolus vulgaris] |
| Swissprot | tr|Q9SD53|Y3720_ARATH | 4.00E-23 | UPF0481 protein At3g47200 |
| trEMBL | tr|V7AM20|V7AM20_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW05913.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01886 | 44821 | 46227 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001886s00042917.1 | PF03140.10 | DUF247 | 29 | 456 | 6.60E-73 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.052 |
| SRR1783600 | control | 0.039 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.156 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.079 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.408 |
| SRR2868004 | Drought Stress (root) | 10.085 |
| SRR2967015 | Control (root) | 11.045 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.168 |
| SRR9715742 | Root | 0.096 |
| SRR9715743 | Root | 0.351 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.081 |
| SRR8749028 | MeJA induced 9h | 0.190 |
| SRR8749029 | MeJA induced 9h | 0.048 |
| SRR8749030 | Uninduced | 0.045 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.177 |
| SRR8400027 | Control - Root | 0.478 |