Gene detail information of Glyur001885s00035913.2 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G62830.2 | 1.00E-06 | NAD(P)-binding Rossmann-fold superfamily protein |
| NR | XP_008345966.1 | 2.20E-06 | PREDICTED: UDP-glucuronic acid decarboxylase 4 [Malus domestica] |
| Swissprot | tr|Q8S8T4|UXS4_ARATH | 8.00E-08 | UDP-glucuronic acid decarboxylase 4 |
| trEMBL | tr|A0A059B4W1|A0A059B4W1_EUCGR | 1.00E-06 | Uncharacterized protein {ECO:0000313|EMBL:KCW61168.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01885 | 44682 | 49713 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K08678 | UXS1, uxs | EC:4.1.1.35 | Amino sugar and nucleotide sugar metabolism | map00520 |
| Amino sugar and nucleotide sugar metabolism | map00520 |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.252 |
| SRR1783600 | control | 0.249 |
| SRR1783602 | moderate drought stress | 0.609 |
| SRR1811619 | moderate drought stress | 0.506 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.157 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.140 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.981 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.103 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.453 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.379 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.721 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.422 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.077 |
| SRR2868004 | Drought Stress (root) | 1.206 |
| SRR2967015 | Control (root) | 1.217 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.344 |
| SRR9715740 | Leaf | 2.750 |
| SRR9715741 | Leaf | 2.186 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.119 |
| SRR9715743 | Root | 0.159 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.013 |
| SRR8749028 | MeJA induced 9h | 0.383 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.110 |
| SRR8749031 | Uninduced | 0.377 |
| SRR8749032 | Uninduced | 0.211 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.930 |
| SRR8400027 | Control - Root | 0.917 |