Gene detail information of Glyur001881s00033147 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G48770.1 | 7.00E-154 | DNA binding;ATP binding |
| NR | KEH25047.1 | 0 | ATP/DNA-binding protein [Medicago truncatula] |
| trEMBL | tr|A0A072U5V2|A0A072U5V2_MEDTR | 0 | ATP/DNA-binding protein {ECO:0000313|EMBL:KEH25047.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01881 | 31487 | 35506 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 21.245 |
| SRR1783600 | control | 21.444 |
| SRR1783602 | moderate drought stress | 7.356 |
| SRR1811619 | moderate drought stress | 7.311 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.349 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.265 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.142 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.139 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.168 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.065 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.907 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.102 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.835 |
| SRR2868004 | Drought Stress (root) | 3.081 |
| SRR2967015 | Control (root) | 2.677 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.740 |
| SRR9715740 | Leaf | 1.859 |
| SRR9715741 | Leaf | 0.936 |
| SRR9715739 | Root | 0.632 |
| SRR9715742 | Root | 8.125 |
| SRR9715743 | Root | 6.942 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.609 |
| SRR8749028 | MeJA induced 9h | 0.957 |
| SRR8749029 | MeJA induced 9h | 0.276 |
| SRR8749030 | Uninduced | 0.493 |
| SRR8749031 | Uninduced | 0.422 |
| SRR8749032 | Uninduced | 0.324 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.324 |
| SRR8400027 | Control - Root | 1.857 |