Gene detail information of Glyur001866s00038778 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G31330.1 | 2.00E-83 | Protein of unknown function, DUF599 |
| NR | XP_003534066.1 | 3.21E-139 | PREDICTED: uncharacterized protein LOC100815851 [Glycine max] |
| COG | YP_004371043.1 | 4.00E-31 | hypothetical protein Desac_2033 [Desulfobacca acetoxidans DSM 11109] |
| trEMBL | tr|I1L3Q4|I1L3Q4_SOYBN | 1.00E-139 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G28750.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01866 | 26998 | 30337 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001866s00038778.1 | PF04654.7 | DUF599 | 11 | 210 | 4.20E-62 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.279 |
| SRR1783600 | control | 0.280 |
| SRR1783602 | moderate drought stress | 1.829 |
| SRR1811619 | moderate drought stress | 1.799 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.277 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.278 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.367 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.309 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 46.828 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 47.252 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.478 |
| SRR2868004 | Drought Stress (root) | 2.498 |
| SRR2967015 | Control (root) | 1.992 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 26.646 |
| SRR9715740 | Leaf | 55.807 |
| SRR9715741 | Leaf | 63.564 |
| SRR9715739 | Root | 0.780 |
| SRR9715742 | Root | 5.022 |
| SRR9715743 | Root | 4.801 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.816 |
| SRR8400027 | Control - Root | 3.756 |