Gene detail

Gene detail information of Glyur001864s00033367

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G35300.4	0	tonoplast monosaccharide transporter2
NR	XP_004500684.1	0	PREDICTED: monosaccharide-sensing protein 2-like isoform X1 [Cicer arietinum]
COG	YP_003405887.1	4.00E-42	sugar transporter [Haloterrigena turkmenica DSM 5511]
Swissprot	tr\|Q8LPQ8\|MSSP2_ARATH	0	Monosaccharide-sensing protein 2
trEMBL	tr\|I1K6U5\|I1K6U5_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA06G00220.1}

Sequence

Transcript Sequence

>Glyur001864s00033367.1
AAAAAAATTTACATACCAATATACAATTTTACATCTTACTCAAAAAATATGAAAAAAAACGAAAATACATATCATTCCACTGGTTAAAATTAAAAATACAANAAAAACGAAAATGCATTGGTTATTTTATTTCGAACAAACAAACGTCCTCTTAAAAATTCTCGTTTACAATTCGTGAACGATCCTCGCACCGGGAAAAAGGAAGAAATNATTTTTTGATCTTTTGTTTACTATTTTTACGAAAACGTTTTTTTTTTTTGAAACAAAATTTTTACGAAAACGATTTTGAAGCGTGAAGTGTGTGTCGTATGAGTGATGATTCTTTGACGCATAACTGAATTCCGATCGGGGAGGGTGGTGACGTGCAGAGCAGTGANAGAGCAACACGGGCAGGTGTCCAGCAGCGAGCCTCTGTTGCAAAAAAAACAGGGGGATCAATTTCATTTCATTACCTGCTTTACTTTTCGACCCGGCGAATAGGATCGCTACTTGTGTTGTTTTCTATACGCCTTTCGTTGTCTTAGTACTGCACTCTAGTATTAGTTTTTTAATATTTTAGGAATAAAAAAGACAAAAAACNAAAAAGAGGAAAGAAGGAGCTCCACCTTCATCCTACACAAGACACAAGTTGCAGTGAGTGACCCATGTCCTTTTCTGCGTCTGATATACTGGAAACTCCCAACTCAATTGACGCTCCAAACCAAGGTGATTTGATTAGGCTGATTGATCGCAAAAGTAATTGAAACAATGAGCGGAGCTGTTATTGTTGCTGTTGCTGCTGCTATCGGTAACTTACTGCAAGGATGGGATAATGCGACTATTGCAGGATCTATTTTATACATAAAGAAGGAGTTTCAATTAGAAAGTGAACCTACAGTAGAAGGTCTAATTGTGGCTATGTCACTTATCGGAGCCACCGTGGTTACTACATGCTCCGGAGCCCTATCAGACTTGCTAGGCCGTCGTCCCATGTTGATTATCTCCTCTATCCTTTATTTTGTTAGTTCTCTTGTGATGCTTTGGTCTCCAAACGTTTATATCCTCCTCTTTGCGAGACTTTTAGATGGTCTGGGAATCGGTTTGGCAGTTACCTTGGTACCTCTTTACATATCTGAGATAGCTCCTCCTGAAATTAGGGGATTACTTAATACACTTCCACAGTTCACTGGTTCTGCTGGAATGTTTTTCTCCTACTGTATGGTGTTTGGGATGTCACTAATGAAGGCGCCAAGCTGGAGACTCATGCTGGGTGTTCTTTCAGTCCCCTCTCTTATTTATTTTGCACTCACACTATTGTTATTGCCCGAGTCTCCAAGGTGGCTTGTCAGTAAAGGCCGAATGATTGAGGCTAAGAAGGTTTTGCAGCGCCTTCGTGGAAGGGAAGATGTTTCCGGTGAGATGGCTTTACTGGTTGAGGGTCTTGGAGTNGGGGGTGATACATCCATAGAAGAGTACATAGTTGGTCCAGCCAATGAATTTGCTGATGAAGAGGATCCGTCTACTGGTAAAGATCAGATCAAGTTGTATGGGCCCGAACAAGGTCAGTCCTGGGTTGCCAGACCTGTCACCGGACAGAATTCCATTGGCCTTGTATCTCGAAAAGGAAGCATGGCAAATCAGAGTGGTCTAGTGGACCCTTTAGTGACCCTTTTCGGTAGTGTCCATGAGAAGCTCCCGGAAACAGGAAGCATGCGAAGCACCCTTTTTCCACACTTTGGAAGTATGTTTAGTGTTGGGGGAAATCAGCCTAGGAATGAAGATTGGGATGAAGAAAGCCTTGCCAGAGAGGGTGATGACTATGCTTCTGATGCTGCTGCCGGTGATTCTGATGACAATTTGCAGAGTCCATTGATCTCACGTCAAACAACTAGTCTGGATAAGGACATACCTACGCCTGCCCATGGTAGCCTTTCAAGCATGAGGCAAGGTAGTCTTTTACAAGGAAATGCAGGAGAACCTGCTGGTAGTACTGGGATTGGTGGTGGTTGGCAACTAGCTTGGAAATGGTCTGAGCGAGAAGGCCCAGATGGAAAGAAGGAAGGTGGTTTCAAGAGAATATATTTACATCAAGAGGGTGGTGCTGGATCTATACGTGGGTCTGTGGTTTCACTTCCTGGTGGTGATGTGCCAACAGATGGTGAGGTTGTACAGGCTGCTGCTCTTGTGAGTCAGCCAGCTCTTTATAACAAGGAGCTCATGCATCAGCAGCCAGTTGGACCAGCTATGATTCATCCATCTGAAACAGCTGCAAAAGGGCCAAGCTGGAGTGATCTTTTTGAACCTGGGGTGAAGCATGCACTGATTGTGGGGGTGGGAATTCAAATTCTTCAGCAGGCAGGTGTTGGTTATCTTCTTTCAAACCTGGGCCTTGGTTCTACTTCTTCATCTTTTCTTATTAGTGCCGTGGTGACCTTGTTGATGCTTCCTTGTATAGCTGTTGCCATGAGGCTCATGGATATTTCTGGTAGAAGGACTTTGCTGCTCAGTACAATCCCCGTCTTGATAGTATCACTTCTCATATTAGTCCTAGGGAGTCTTGTGGATTTGGGCAGCACTGCAAACGCATCAATCTCAACCATTAGTGTTGTTATCTATTTCTGTTTCTTTGTCATGGGATTTGGGCCAGTTCCTAATATACTTTGTGCTGAGATCTTCCCCACTCGAGTTCGTGGTCTCTGCATTGCCATATGTGCTCTTACCTTTTGGATATGTGACATCATTGTCACCTACACACTCCCAGTTATGCTTAATTCTGTAGGCCTTGCTGGTGTTTTTGGTATATATGCAGTCGTGTGCTGCATAGCTTGGGTGTTTGTTTTTCTGAAAGTTCCAGAAACCAAGGGCATGCCACTGGAAGTGATCATTGAGTTCTTCTCTGTCGGAGCAAAACAGGCTGAGGCTGCCAAGCATAATTGACTTAAGGATGTGATTAATTGAAAGTTTTGACGGTACCTTTTAATTGTTTTCAATCTACGGTTTTGTTTGGAATCTTTTCCTCTTTTCAATTTATCTTTTCCTCTTTTCAATTTATCTTTCCTATTAATCTTTCTTTTCCGTGGGTTGAGATTGAGAAACAAAAAACTTTGTTTCTGTAAAAAACGTTAATTTTTCTAGTTNATTTATGGGACTTTATATACTTCTTAGTTACCCTCTTATTCAAATTGTTAAATGACATGCTTTATTTACTCTTTTGTTTAACCATGGTATTAATGCG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01864	26120	33766	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055085 transmembrane transport

cellular_component

GO:0016020 membrane

GO:0016021 integral component of membrane

molecular_function

GO:0005215 transporter activity

GO:0022857 transmembrane transporter activity

GO:0022891 substrate-specific transmembrane transporter activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001864s00033367.1	PF00083.19	Sugar_tr	7	219	3.00E-52
Glyur001864s00033367.1	PF00083.19	Sugar_tr	501	705	6.50E-31

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	32.556
SRR1783600	control	32.762
SRR1783602	moderate drought stress	22.691
SRR1811619	moderate drought stress	22.473

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	42.034
DRR006520	Root Summer glycyrrhizin high producing strain	41.353
DRR006521	Root Winter glycyrrhizin high producing strain	35.324
DRR006522	Root Winter glycyrrhizin high producing strain	34.477
DRR006523	Root Summer glycyrrhizin low producing strain	39.077
DRR006524	Root Summer glycyrrhizin low producing strain	39.300
DRR006525	Leaf Summer glycyrrhizin high producing strain	7.383
DRR006526	Leaf Summer glycyrrhizin high producing strain	7.324

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	61.887
SRR2868004	Drought Stress (root)	59.187
SRR2967015	Control (root)	53.575

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	13.773
SRR9715740	Leaf	13.942
SRR9715741	Leaf	19.029
SRR9715739	Root	48.051
SRR9715742	Root	52.285
SRR9715743	Root	50.463

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	18.303
SRR8749028	MeJA induced 9h	14.332
SRR8749029	MeJA induced 9h	9.797
SRR8749030	Uninduced	8.069
SRR8749031	Uninduced	4.709
SRR8749032	Uninduced	3.687

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	52.650
SRR8400027	Control - Root	52.270