Gene detail information of Glyur001862s00036507 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G05510.1 | 4.00E-134 | Mad3/BUB1 homology region 1 |
| NR | XP_006591389.1 | 0 | PREDICTED: probable inactive serine/threonine-protein kinase bub1-like [Glycine max] |
| Swissprot | tr|O22806|BUBR1_ARATH | 1.00E-23 | Mitotic spindle checkpoint protein BUBR1 |
| trEMBL | tr|K7LRS1|K7LRS1_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G35550.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01862 | 52623 | 55303 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001862s00036507.1 | PF08311.7 | Mad3_BUB1_I | 16 | 128 | 4.80E-32 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.443 |
| SRR1783600 | control | 3.545 |
| SRR1783602 | moderate drought stress | 3.823 |
| SRR1811619 | moderate drought stress | 3.972 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.657 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.489 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.593 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.234 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.636 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.712 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.838 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.627 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.068 |
| SRR2868004 | Drought Stress (root) | 3.803 |
| SRR2967015 | Control (root) | 5.784 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.062 |
| SRR9715740 | Leaf | 2.447 |
| SRR9715741 | Leaf | 1.152 |
| SRR9715739 | Root | 0.421 |
| SRR9715742 | Root | 1.489 |
| SRR9715743 | Root | 1.387 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.950 |
| SRR8749028 | MeJA induced 9h | 9.317 |
| SRR8749029 | MeJA induced 9h | 6.833 |
| SRR8749030 | Uninduced | 5.442 |
| SRR8749031 | Uninduced | 2.399 |
| SRR8749032 | Uninduced | 1.470 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.587 |
| SRR8400027 | Control - Root | 4.082 |