Gene detail information of Glyur001856s00032080 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G17130.1 | 2.00E-31 | Plant invertase/pectin methylesterase inhibitor superfamily protein |
| NR | KHN02873.1 | 1.04E-102 | hypothetical protein glysoja_009739 [Glycine soja] |
| Swissprot | tr|F4HWQ8|CVIF1_ARATH | 9.00E-22 | Cell wall / vacuolar inhibitor of fructosidase 1 (Precursor) |
| trEMBL | tr|I1KMN8|I1KMN8_SOYBN | 9.00E-103 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G36590.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01856 | 35216 | 35782 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001856s00032080.1 | PF04043.10 | PMEI | 40 | 181 | 1.70E-24 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 28.630 |
| SRR1783600 | control | 27.739 |
| SRR1783602 | moderate drought stress | 7.068 |
| SRR1811619 | moderate drought stress | 6.975 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 44.568 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 44.549 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.722 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.376 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 60.255 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 60.156 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.627 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.610 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.823 |
| SRR2868004 | Drought Stress (root) | 7.061 |
| SRR2967015 | Control (root) | 4.264 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 13.493 |
| SRR9715740 | Leaf | 15.993 |
| SRR9715741 | Leaf | 15.870 |
| SRR9715739 | Root | 17.574 |
| SRR9715742 | Root | 22.537 |
| SRR9715743 | Root | 23.057 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.113 |
| SRR8749029 | MeJA induced 9h | 0.401 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 75.688 |
| SRR8400027 | Control - Root | 82.023 |