Gene detail information of Glyur001856s00032077 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G47960.1 | 7.00E-24 | cell wall / vacuolar inhibitor of fructosidase 1 |
| NR | AFK48395.1 | 2.21E-93 | unknown [Lotus japonicus] |
| Swissprot | tr|F4HWQ8|CVIF1_ARATH | 8.00E-35 | Cell wall / vacuolar inhibitor of fructosidase 1 (Precursor) |
| trEMBL | tr|I3T7A3|I3T7A3_LOTJA | 8.00E-94 | Uncharacterized protein {ECO:0000313|EMBL:AFK48395.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01856 | 28810 | 29346 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001856s00032077.1 | PF04043.10 | PMEI | 35 | 173 | 1.30E-23 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 137.504 |
| SRR1783600 | control | 134.815 |
| SRR1783602 | moderate drought stress | 195.476 |
| SRR1811619 | moderate drought stress | 192.755 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 264.221 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 240.585 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 465.445 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 500.452 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 302.328 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 305.893 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 121.515 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 139.087 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 50.116 |
| SRR2868004 | Drought Stress (root) | 103.661 |
| SRR2967015 | Control (root) | 176.909 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 26.440 |
| SRR9715740 | Leaf | 60.303 |
| SRR9715741 | Leaf | 39.820 |
| SRR9715739 | Root | 6.098 |
| SRR9715742 | Root | 20.395 |
| SRR9715743 | Root | 18.029 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 23.924 |
| SRR8749028 | MeJA induced 9h | 92.951 |
| SRR8749029 | MeJA induced 9h | 38.869 |
| SRR8749030 | Uninduced | 27.090 |
| SRR8749031 | Uninduced | 13.924 |
| SRR8749032 | Uninduced | 37.334 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 70.118 |
| SRR8400027 | Control - Root | 39.732 |