Gene detail information of Glyur001856s00032075 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G49525.1 | 7.00E-06 | |
| NR | XP_006597691.1 | 5.17E-12 | PREDICTED: uncharacterized protein LOC102663947 [Glycine max] |
| trEMBL | tr|K7MB91|K7MB91_SOYBN | 2.00E-12 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G14770.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01856 | 18460 | 18675 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.980 |
| SRR1783600 | control | 6.142 |
| SRR1783602 | moderate drought stress | 3.797 |
| SRR1811619 | moderate drought stress | 4.643 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.813 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.100 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.923 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.581 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.064 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.206 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.983 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.949 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 15.915 |
| SRR2868004 | Drought Stress (root) | 15.533 |
| SRR2967015 | Control (root) | 37.346 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 28.318 |
| SRR9715740 | Leaf | 23.800 |
| SRR9715741 | Leaf | 23.951 |
| SRR9715739 | Root | 39.050 |
| SRR9715742 | Root | 23.531 |
| SRR9715743 | Root | 25.409 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 64.745 |
| SRR8749028 | MeJA induced 9h | 53.058 |
| SRR8749029 | MeJA induced 9h | 109.495 |
| SRR8749030 | Uninduced | 59.152 |
| SRR8749031 | Uninduced | 72.689 |
| SRR8749032 | Uninduced | 109.449 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 18.272 |
| SRR8400027 | Control - Root | 21.418 |