Gene detail

Gene detail information of Glyur001854s00043533

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G37330.1	3.00E-115	cytochrome P450, family 81, subfamily D, polypeptide 4
NR	XP_003611658.1	0	Isoflavone 2'-hydroxylase [Medicago truncatula]
COG	YP_001865045.1	6.00E-30	cytochrome P450 [Nostoc punctiforme PCC 73102]
Swissprot	tr\|Q6WNQ8\|C81E8_MEDTR	0	Cytochrome P450 81E8 {ECO:0000303\|PubMed:14617078}
trEMBL	tr\|G7K579\|G7K579_MEDTR	0	Cytochrome P450 family 81 protein {ECO:0000313\|EMBL:AES94616.1}

Sequence

Transcript Sequence

>Glyur001854s00043533.1
ATGACCCCCTTCCATTATCCCCTCATCGTCTCTGTGGTTGTTTTTGTGGTCACTTTGAAGCTCTTGNTCCGCACCATCACTAGAAGATTCAAAAACCTTCCCCCAGGCCCACATTGTCTCCCTGTAATCGGAAACCTCCACCAAGTCAAACAGCCACTCCACCTCACCCTCCATGCCCTATCACAGAAATACGGCCCAGTCTTTTCTCTTTGGTTCGGATCTCGCCTAGTAGTGGTCGTTCTTTCAACCCATCGTCTCAACTCCTTCTTGGAAGTCCGGAGGGACGAGATCATGAGGCTAATACAGAAGCTAGCCAAGGAGGATCACTCGTGCAACAATGGCTTTGCCGAAGTGGAGCTTAGTTCCATGTTTTCAGAAATGACGTTCAACACTATAATGAGAATGGTGTCGGGGAAGAGATACTATGGTGAGGACTGTGACGTGAGCGATGTGGAGGAAGCAAGGATGTTTAGAGAGATCATCAAGGAGTTGGTTACTTTAGGAGGGACGGGCAACCCAGGAGACTTCTTGGCGTTTCTGAGGTGGTTTGATTTTGATGGTTTGGAGAAGAGGCTTAAGAAGATTAGCANGAAGACTGATGGGTTCTTACAGGGACTCATTGATGAGCATCGAAACGGGAGGAAGCATATTGCTGATACCATGATTGACCATCTCCTTGAGCAGCAACAGTCACAACCTGAATACTATACGGATCAAATCATCAAAGGACTTATTGTGGTTTTGCTACTTGCAGGAACAGACACATCAGCCATAACCTTAGAATGGGCAATGTCNCTTTTACTAAATCATCCAGATACATTGAAAAGAGCAAAAGATGAATTGGACACTTACATAGGACAAGATCGCTTAATAGATGAGACTGATATTTCAAAACTTGCTTACCTTCAAAGCATTGTCTATGAGACACTTCGATTGCATCCTGCGGCTCCGCTATTACTGCCTCATTTGTCTTCGGAGNATTGCACCATAGGAGAATATAATGTCCCGCAAAATACAATTGTGTTGGTCAATGCTTGGGCCATTCATAGAGATCCCAAGTTATATAGTGATCCTACTTGCTTTAAGCCCGAGAGGTTTGAGAAAGAAGGTGAAGCGAATAAGCTACTTTCATTTGGGATGGGGAGAAGGGCCTGTCCTGGAGCAAACATGGCCCAACGCACGGTGGGCTTAACTCTAGGCTTATTGATTCAATGTTTTGAGTGGAAACGGGTAAGTGACAAAGAAATTGACATGACAGAAGGAAAAGGAATCACCGTGGCAAAAGAAAGTGTCTTAAAAGCCAAGTGTAAAGTGCGCCATCCATCAAGAATTAAAGATATTTTCTAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01854	4946	8673	+

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP81D4

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function

GO:0005506 iron ion binding

GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001854s00043533.1	PF00067.17	p450	34	83	2.60E-08
Glyur001854s00043533.1	PF00067.17	p450	85	426	3.30E-70

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	3.322
SRR1783600	control	3.366
SRR1783602	moderate drought stress	6.853
SRR1811619	moderate drought stress	6.604

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.321
DRR006520	Root Summer glycyrrhizin high producing strain	0.397
DRR006521	Root Winter glycyrrhizin high producing strain	11.165
DRR006522	Root Winter glycyrrhizin high producing strain	11.609
DRR006523	Root Summer glycyrrhizin low producing strain	1.864
DRR006524	Root Summer glycyrrhizin low producing strain	2.165
DRR006525	Leaf Summer glycyrrhizin high producing strain	62.087
DRR006526	Leaf Summer glycyrrhizin high producing strain	61.986

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	1.096
SRR2868004	Drought Stress (root)	8.128
SRR2967015	Control (root)	1.088

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	114.828
SRR9715740	Leaf	145.066
SRR9715741	Leaf	130.085
SRR9715739	Root	1.918
SRR9715742	Root	5.151
SRR9715743	Root	4.095

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	2.582
SRR8749028	MeJA induced 9h	2.313
SRR8749029	MeJA induced 9h	5.435
SRR8749030	Uninduced	0.047
SRR8749031	Uninduced	0.028
SRR8749032	Uninduced	2.370

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	10.185
SRR8400027	Control - Root	10.623