Gene detail information of Glyur001852s00037945 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G14410.1 | 8.00E-10 | |
| NR | AFK38106.1 | 7.67E-31 | unknown [Medicago truncatula] |
| trEMBL | tr|I3SCW4|I3SCW4_MEDTR | 3.00E-31 | Uncharacterized protein {ECO:0000313|EMBL:AFK38106.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01852 | 53662 | 55342 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.176 |
| SRR1783600 | control | 0.139 |
| SRR1783602 | moderate drought stress | 0.147 |
| SRR1811619 | moderate drought stress | 0.223 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.642 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.514 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.008 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.002 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.024 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.995 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.884 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.180 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.299 |
| SRR2868004 | Drought Stress (root) | 3.278 |
| SRR2967015 | Control (root) | 2.932 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.290 |
| SRR9715740 | Leaf | 1.947 |
| SRR9715741 | Leaf | 1.451 |
| SRR9715739 | Root | 0.956 |
| SRR9715742 | Root | 2.040 |
| SRR9715743 | Root | 1.677 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.034 |
| SRR8749028 | MeJA induced 9h | 0.166 |
| SRR8749029 | MeJA induced 9h | 0.214 |
| SRR8749030 | Uninduced | 0.060 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.018 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.044 |
| SRR8400027 | Control - Root | 0.947 |