Gene detail information of Glyur001849s00031476 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G16660.1 | 2.00E-23 | |
| NR | XP_003537695.1 | 4.65E-68 | PREDICTED: uncharacterized protein LOC100787910 [Glycine max] |
| trEMBL | tr|I1JAP0|I1JAP0_SOYBN | 1.00E-66 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G44450.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01849 | 10169 | 12101 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 26.897 |
| SRR1783600 | control | 26.616 |
| SRR1783602 | moderate drought stress | 23.588 |
| SRR1811619 | moderate drought stress | 23.560 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 37.940 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 35.955 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 12.872 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 11.458 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 26.599 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 29.715 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 20.924 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 19.967 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 95.835 |
| SRR2868004 | Drought Stress (root) | 57.150 |
| SRR2967015 | Control (root) | 55.399 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 43.033 |
| SRR9715740 | Leaf | 29.762 |
| SRR9715741 | Leaf | 30.253 |
| SRR9715739 | Root | 21.316 |
| SRR9715742 | Root | 19.741 |
| SRR9715743 | Root | 18.999 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 115.138 |
| SRR8749028 | MeJA induced 9h | 43.138 |
| SRR8749029 | MeJA induced 9h | 66.440 |
| SRR8749030 | Uninduced | 24.249 |
| SRR8749031 | Uninduced | 29.247 |
| SRR8749032 | Uninduced | 27.259 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 114.791 |
| SRR8400027 | Control - Root | 91.846 |