Gene detail information of Glyur001848s00041052 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G01300.1 | 5.00E-53 | PEBP (phosphatidylethanolamine-binding protein) family protein |
| NR | XP_004506718.1 | 5.28E-89 | PREDICTED: UPF0098 protein MTH_273-like [Cicer arietinum] |
| COG | YP_004695024.1 | 8.00E-28 | YbhB YbcL family protein [Nitrosomonas sp. Is79A3] |
| trEMBL | tr|A0A072UGX9|A0A072UGX9_MEDTR | 1.00E-88 | Phosphatidylethanolamine-binding protein {ECO:0000313|EMBL:KEH28917.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01848 | 36947 | 37518 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001848s00041052.1 | PF01161.15 | PBP | 20 | 141 | 1.10E-24 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.495 |
| SRR1783600 | control | 0.502 |
| SRR1783602 | moderate drought stress | 3.335 |
| SRR1811619 | moderate drought stress | 4.170 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.739 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.854 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 27.066 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 27.898 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 40.271 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 40.346 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.324 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.733 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.848 |
| SRR2868004 | Drought Stress (root) | 2.014 |
| SRR2967015 | Control (root) | 1.568 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 10.872 |
| SRR9715740 | Leaf | 5.494 |
| SRR9715741 | Leaf | 5.853 |
| SRR9715739 | Root | 0.807 |
| SRR9715742 | Root | 4.357 |
| SRR9715743 | Root | 1.792 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.283 |
| SRR8749028 | MeJA induced 9h | 15.102 |
| SRR8749029 | MeJA induced 9h | 3.666 |
| SRR8749030 | Uninduced | 2.420 |
| SRR8749031 | Uninduced | 0.141 |
| SRR8749032 | Uninduced | 2.348 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.476 |
| SRR8400027 | Control - Root | 0.818 |