Gene detail information of Glyur001842s00036007 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | AEV59593.1 | 9.59E-70 | pathogenesis-related protein class 10 [Oxytropis arctobia] |
| Swissprot | tr|P26987|SAM22_SOYBN | 1.00E-66 | Stress-induced protein SAM22 |
| trEMBL | tr|G9BZY2|G9BZY2_9FABA | 4.00E-70 | Pathogenesis-related protein class 10 {ECO:0000313|EMBL:AEV59593.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01842 | 29342 | 30328 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001842s00036007.1 | PF00407.14 | Bet_v_1 | 38 | 139 | 4.20E-17 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 20.769 |
| SRR1783600 | control | 21.585 |
| SRR1783602 | moderate drought stress | 62.464 |
| SRR1811619 | moderate drought stress | 61.993 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.092 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.095 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 38.946 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 37.208 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 56.247 |
| SRR2868004 | Drought Stress (root) | 76.740 |
| SRR2967015 | Control (root) | 14.959 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 88.655 |
| SRR9715740 | Leaf | 36.248 |
| SRR9715741 | Leaf | 56.354 |
| SRR9715739 | Root | 52.019 |
| SRR9715742 | Root | 12.452 |
| SRR9715743 | Root | 23.299 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 66.785 |
| SRR8749028 | MeJA induced 9h | 38.628 |
| SRR8749029 | MeJA induced 9h | 114.899 |
| SRR8749030 | Uninduced | 204.103 |
| SRR8749031 | Uninduced | 2822.637 |
| SRR8749032 | Uninduced | 794.203 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 103.595 |
| SRR8400027 | Control - Root | 112.681 |