Gene detail information of Glyur001841s00029502 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G07570.1 | 6.00E-88 | Cytochrome b561/ferric reductase transmembrane with DOMON related domain |
| NR | XP_007135210.1 | 0 | hypothetical protein PHAVU_010G110300g [Phaseolus vulgaris] |
| Swissprot | tr|Q0WRW8|B561K_ARATH | 2.00E-119 | Cytochrome b561 and DOMON domain-containing protein At3g07570 (Precursor) |
| trEMBL | tr|V7ANQ8|V7ANQ8_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW07204.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01841 | 31426 | 38528 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001841s00029502.1 | PF03351.12 | DOMON | 62 | 147 | 7.70E-09 |
| Glyur001841s00029502.1 | PF03351.12 | DOMON | 254 | 358 | 1.60E-11 |
| Glyur001841s00029502.1 | PF03188.11 | Cytochrom_B561 | 455 | 575 | 7.20E-06 |
| Glyur001841s00029502.2 | PF03351.12 | DOMON | 44 | 127 | 9.90E-09 |
| Glyur001841s00029502.2 | PF03351.12 | DOMON | 234 | 338 | 1.60E-11 |
| Glyur001841s00029502.2 | PF03188.11 | Cytochrom_B561 | 435 | 555 | 7.00E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.824 |
| SRR1783600 | control | 3.506 |
| SRR1783602 | moderate drought stress | 4.380 |
| SRR1811619 | moderate drought stress | 4.209 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.850 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.420 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.971 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.989 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.551 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.801 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.294 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.314 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 50.045 |
| SRR2868004 | Drought Stress (root) | 37.845 |
| SRR2967015 | Control (root) | 42.171 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 8.631 |
| SRR9715740 | Leaf | 8.348 |
| SRR9715741 | Leaf | 7.383 |
| SRR9715739 | Root | 5.993 |
| SRR9715742 | Root | 4.946 |
| SRR9715743 | Root | 4.576 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.656 |
| SRR8749028 | MeJA induced 9h | 6.001 |
| SRR8749029 | MeJA induced 9h | 6.001 |
| SRR8749030 | Uninduced | 11.183 |
| SRR8749031 | Uninduced | 9.334 |
| SRR8749032 | Uninduced | 11.005 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 16.146 |
| SRR8400027 | Control - Root | 20.106 |