Gene detail information of Glyur001841s00029498 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G04039.1 | 2.00E-46 | |
| NR | AFK48251.1 | 5.57E-118 | unknown [Medicago truncatula] |
| trEMBL | tr|I3T6V9|I3T6V9_MEDTR | 2.00E-118 | Uncharacterized protein {ECO:0000313|EMBL:AFK48251.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01841 | 17742 | 19563 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001841s00029498.1 | PF11210.3 | DUF2996 | 98 | 206 | 7.70E-29 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 20.974 |
| SRR1783600 | control | 21.053 |
| SRR1783602 | moderate drought stress | 7.178 |
| SRR1811619 | moderate drought stress | 7.156 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.168 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.183 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 70.673 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 68.799 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.654 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.746 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 256.817 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 255.885 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.435 |
| SRR2868004 | Drought Stress (root) | 1.463 |
| SRR2967015 | Control (root) | 0.780 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 114.357 |
| SRR9715740 | Leaf | 134.972 |
| SRR9715741 | Leaf | 99.345 |
| SRR9715739 | Root | 0.661 |
| SRR9715742 | Root | 0.786 |
| SRR9715743 | Root | 0.312 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.065 |
| SRR8749032 | Uninduced | 0.048 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.561 |
| SRR8400027 | Control - Root | 3.335 |