Gene detail information of Glyur001840s00036325 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G50620.1 | 4.00E-132 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| NR | XP_004511943.1 | 0 | PREDICTED: uncharacterized protein LOC101497581 isoform X1 [Cicer arietinum] |
| COG | NP_435710.1 | 5.00E-07 | NodH sulfotransferase [Sinorhizobium meliloti 1021] |
| trEMBL | tr|G7K807|G7K807_MEDTR | 0 | Sulfotransferase {ECO:0000256|RuleBase:RU361155} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01840 | 23860 | 27678 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001840s00036325.1 | PF00685.22 | Sulfotransfer_1 | 193 | 393 | 1.30E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.128 |
| SRR1783600 | control | 6.322 |
| SRR1783602 | moderate drought stress | 6.921 |
| SRR1811619 | moderate drought stress | 6.606 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.344 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.170 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.816 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.682 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.722 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.831 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.346 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.384 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.814 |
| SRR2868004 | Drought Stress (root) | 9.622 |
| SRR2967015 | Control (root) | 5.447 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.970 |
| SRR9715740 | Leaf | 2.593 |
| SRR9715741 | Leaf | 2.246 |
| SRR9715739 | Root | 1.564 |
| SRR9715742 | Root | 2.507 |
| SRR9715743 | Root | 2.238 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 17.181 |
| SRR8749028 | MeJA induced 9h | 14.332 |
| SRR8749029 | MeJA induced 9h | 11.128 |
| SRR8749030 | Uninduced | 7.613 |
| SRR8749031 | Uninduced | 6.351 |
| SRR8749032 | Uninduced | 3.881 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.896 |
| SRR8400027 | Control - Root | 7.323 |