Gene detail information of Glyur001838s00038465 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G63100.1 | 5.00E-91 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| NR | XP_004515876.1 | 7.44E-171 | PREDICTED: uncharacterized protein LOC101506952 [Cicer arietinum] |
| COG | YP_005030037.1 | 6.00E-08 | conserved membrane protein of unknown function [Azospirillum brasilense Sp245] |
| trEMBL | tr|A0A072URW2|A0A072URW2_MEDTR | 4.00E-157 | S-adenosylmethionine-dependent methyltransferase, putative {ECO:0000313|EMBL:KEH31798.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01838 | 10462 | 17186 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.510 |
| SRR1783600 | control | 2.555 |
| SRR1783602 | moderate drought stress | 4.948 |
| SRR1811619 | moderate drought stress | 5.034 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.450 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.573 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.574 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.466 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.871 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.629 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.896 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.904 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.314 |
| SRR2868004 | Drought Stress (root) | 2.847 |
| SRR2967015 | Control (root) | 2.871 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.175 |
| SRR9715740 | Leaf | 2.479 |
| SRR9715741 | Leaf | 2.075 |
| SRR9715739 | Root | 5.295 |
| SRR9715742 | Root | 13.481 |
| SRR9715743 | Root | 10.924 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.291 |
| SRR8749028 | MeJA induced 9h | 12.956 |
| SRR8749029 | MeJA induced 9h | 15.576 |
| SRR8749030 | Uninduced | 1.252 |
| SRR8749031 | Uninduced | 16.606 |
| SRR8749032 | Uninduced | 17.309 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.642 |
| SRR8400027 | Control - Root | 3.778 |