Gene detail information of Glyur001831s00037926 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G30960.1 | 2.00E-130 | GTP-binding family protein |
| NR | XP_007153196.1 | 0 | hypothetical protein PHAVU_003G015000g [Phaseolus vulgaris] |
| COG | YP_001524921.1 | 3.00E-49 | transcriptional regulator [Azorhizobium caulinodans ORS 571] |
| Swissprot | tr|O82626|ERG_ANTMA | 0 | GTP-binding protein ERG |
| trEMBL | tr|V7C7G2|V7C7G2_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW25190.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01831 | 28959 | 35234 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001831s00037926.1 | PF01926.18 | MMR_HSR1 | 145 | 269 | 2.70E-15 |
| Glyur001831s00037926.1 | PF07650.12 | KH_2 | 354 | 426 | 2.20E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.433 |
| SRR1783600 | control | 7.566 |
| SRR1783602 | moderate drought stress | 10.530 |
| SRR1811619 | moderate drought stress | 10.410 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.568 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.601 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.671 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 8.495 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.893 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.685 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.738 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.612 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.925 |
| SRR2868004 | Drought Stress (root) | 8.738 |
| SRR2967015 | Control (root) | 9.489 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.685 |
| SRR9715740 | Leaf | 8.843 |
| SRR9715741 | Leaf | 4.486 |
| SRR9715739 | Root | 1.121 |
| SRR9715742 | Root | 4.104 |
| SRR9715743 | Root | 4.990 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.458 |
| SRR8749028 | MeJA induced 9h | 5.910 |
| SRR8749029 | MeJA induced 9h | 5.887 |
| SRR8749030 | Uninduced | 1.272 |
| SRR8749031 | Uninduced | 0.685 |
| SRR8749032 | Uninduced | 1.060 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.190 |
| SRR8400027 | Control - Root | 12.850 |