Gene detail information of Glyur001829s00033201 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_002971489.1 | 5.91E-06 | hypothetical protein SELMODRAFT_412224 [Selaginella moellendorffii] |
| trEMBL | tr|D8RKH2|D8RKH2_SELML | 2.00E-06 | Putative uncharacterized protein {ECO:0000313|EMBL:EFJ27238.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01829 | 53338 | 54465 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.622 |
| SRR1783600 | control | 8.595 |
| SRR1783602 | moderate drought stress | 3.746 |
| SRR1811619 | moderate drought stress | 3.027 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.119 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.363 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.191 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.186 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.041 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.002 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.720 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.598 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.518 |
| SRR2868004 | Drought Stress (root) | 3.320 |
| SRR2967015 | Control (root) | 2.648 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.812 |
| SRR9715740 | Leaf | 0.050 |
| SRR9715741 | Leaf | 0.625 |
| SRR9715739 | Root | 0.083 |
| SRR9715742 | Root | 1.086 |
| SRR9715743 | Root | 2.946 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.278 |
| SRR8400027 | Control - Root | 3.531 |