Gene detail information of Glyur001825s00027397 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G16360.2 | 3.00E-61 | HPT phosphotransmitter 4 |
| NR | XP_003531648.1 | 8.15E-99 | PREDICTED: histidine-containing phosphotransfer protein 4-like isoform X1 [Glycine max] |
| COG | NP_486915.1 | 2.00E-06 | two-component hybrid sensor and regulator [Nostoc sp. PCC 7120] |
| Swissprot | tr|Q9LU15|AHP4_ARATH | 1.00E-62 | Histidine-containing phosphotransfer protein 4 |
| trEMBL | tr|I1KV21|I1KV21_SOYBN | 3.00E-99 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G21510.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01825 | 35368 | 37405 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001825s00027397.1 | PF01627.18 | Hpt | 44 | 129 | 1.40E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.683 |
| SRR1783600 | control | 4.475 |
| SRR1783602 | moderate drought stress | 2.751 |
| SRR1811619 | moderate drought stress | 2.413 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.353 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.771 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.861 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.855 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.443 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.644 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.605 |
| SRR2868004 | Drought Stress (root) | 0.239 |
| SRR2967015 | Control (root) | 1.582 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.208 |
| SRR9715740 | Leaf | 0.649 |
| SRR9715741 | Leaf | 0.156 |
| SRR9715739 | Root | 0.117 |
| SRR9715742 | Root | 0.134 |
| SRR9715743 | Root | 0.662 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.094 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.011 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.386 |
| SRR8400027 | Control - Root | 0.688 |