Gene detail information of Glyur001825s00027395 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G12540.1 | 3.00E-21 | |
| NR | XP_004510312.1 | 0 | PREDICTED: uncharacterized protein LOC101488822 [Cicer arietinum] |
| trEMBL | tr|G7LGP0|G7LGP0_MEDTR | 2.00E-160 | Uncharacterized protein {ECO:0000313|EMBL:AET01520.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01825 | 24987 | 26859 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.746 |
| SRR1783600 | control | 1.715 |
| SRR1783602 | moderate drought stress | 1.157 |
| SRR1811619 | moderate drought stress | 1.273 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.961 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.002 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.223 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.218 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.235 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.266 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.870 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.807 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.461 |
| SRR2868004 | Drought Stress (root) | 2.038 |
| SRR2967015 | Control (root) | 1.984 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.349 |
| SRR9715740 | Leaf | 0.255 |
| SRR9715741 | Leaf | 0.581 |
| SRR9715739 | Root | 0.464 |
| SRR9715742 | Root | 0.425 |
| SRR9715743 | Root | 0.593 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.161 |
| SRR8749028 | MeJA induced 9h | 4.194 |
| SRR8749029 | MeJA induced 9h | 5.370 |
| SRR8749030 | Uninduced | 1.285 |
| SRR8749031 | Uninduced | 0.423 |
| SRR8749032 | Uninduced | 0.430 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.736 |
| SRR8400027 | Control - Root | 1.870 |