Gene detail information of Glyur001824s00042140 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01824 | 5523 | 6272 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.727 |
| SRR1783600 | control | 2.397 |
| SRR1783602 | moderate drought stress | 9.038 |
| SRR1811619 | moderate drought stress | 7.790 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.915 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.223 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.884 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.378 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.333 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.027 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.540 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.499 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.304 |
| SRR2868004 | Drought Stress (root) | 18.425 |
| SRR2967015 | Control (root) | 12.109 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.048 |
| SRR9715740 | Leaf | 6.317 |
| SRR9715741 | Leaf | 2.186 |
| SRR9715739 | Root | 0.200 |
| SRR9715742 | Root | 0.956 |
| SRR9715743 | Root | 0.328 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.905 |
| SRR8749028 | MeJA induced 9h | 6.798 |
| SRR8749029 | MeJA induced 9h | 2.890 |
| SRR8749030 | Uninduced | 2.349 |
| SRR8749031 | Uninduced | 2.334 |
| SRR8749032 | Uninduced | 4.542 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.195 |
| SRR8400027 | Control - Root | 1.869 |