Gene detail information of Glyur001820s00032857 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G33280.1 | 7.00E-107 | Major facilitator superfamily protein |
| NR | XP_004516336.1 | 0 | PREDICTED: probable folate-biopterin transporter 8, chloroplastic-like [Cicer arietinum] |
| COG | YP_007125347.1 | 3.00E-37 | folate/biopterin transporter [Microcoleus sp. PCC 7113] |
| Swissprot | tr|O22780|FBT9_ARATH | 3.00E-173 | Probable folate-biopterin transporter 9, chloroplastic (Precursor) |
| trEMBL | tr|G7IVP1|G7IVP1_MEDTR | 0 | Folate/biopterin transporter {ECO:0000313|EMBL:AES68460.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01820 | 18711 | 22827 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001820s00032857.1 | PF03092.11 | BT1 | 100 | 478 | 1.10E-87 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 68.372 |
| SRR1783600 | control | 68.236 |
| SRR1783602 | moderate drought stress | 50.688 |
| SRR1811619 | moderate drought stress | 50.133 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 42.379 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 42.069 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.897 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.736 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 29.571 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 28.576 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.821 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.685 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.374 |
| SRR2868004 | Drought Stress (root) | 7.576 |
| SRR2967015 | Control (root) | 4.339 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 50.785 |
| SRR9715740 | Leaf | 26.548 |
| SRR9715741 | Leaf | 42.780 |
| SRR9715739 | Root | 139.513 |
| SRR9715742 | Root | 106.433 |
| SRR9715743 | Root | 112.672 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.554 |
| SRR8749028 | MeJA induced 9h | 7.252 |
| SRR8749029 | MeJA induced 9h | 2.496 |
| SRR8749030 | Uninduced | 5.782 |
| SRR8749031 | Uninduced | 1.161 |
| SRR8749032 | Uninduced | 1.062 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 63.589 |
| SRR8400027 | Control - Root | 87.371 |