Gene detail

Gene detail information of Glyur001820s00032856.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G62660.1	4.00E-114	Glycosyl hydrolases family 32 protein
NR	XP_003526374.1	0	PREDICTED: beta-fructofuranosidase, soluble isoenzyme I-like [Glycine max]
COG	YP_005439841.1	6.00E-12	putative sucrose-6-phosphate hydrolase [Selenomonas ruminantium subsp. lactilytica TAM6421]
Swissprot	tr\|P80065\|INVB_DAUCA	2.00E-153	Beta-fructofuranosidase, soluble isoenzyme I (Precursor)
trEMBL	tr\|K7KYK6\|K7KYK6_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA06G47640.2}

Sequence

Transcript Sequence

>Glyur001820s00032856.1
ATGGGTCATGCTGTATCAAGGGACATGATTCATTGGCTCTACCTTCCCATTGCCCTGGTACCTGACAAGTGGTTCGATATCAACGATGGCAAAATCATAATGCTTTACACAGGTGACACCCATAAGTATGTGCAAGTCCAGAATCTTGCTTATCCCGCCAACCTATCCGATCCCCTTCTCCTTGATTGGGTCAAATATGCGGGTAATCCAATCTTGGAGCCCCGCCCGGCATTGGCGCGAAGAATTTCCGTGACCCGAGCACCGGTTGGGTTGGGCCAGATGGAAAATGGAGGTCATAGTTGGGTCAAAGAAAGGAAAACGGGCTTTTCATTAGTTTATAAGACCATAGATTTTACAAAATTTGAGCTCAATAGTAACTACTTGCATGCGGTTCCGGGTACGGGTATGTGGGAATGTGTAGACTTTTACCCGGTTTCAATAAATGGGTCAAAGGGTTTGGACACATCGGTAAATGGTCCACAAGTTAAGCATGTGCTAAAGGCTAGTCTTGATGATACAAAGGTGGATAGTTATGCACTTGGACCTATTTTATTGGAAATGATACATGGTAAAAGAGAGAAGGATCTTGTTTGTTGGATTAATGAAACCGACACAAAGAGTGATGACTTGAGAAAGGGTTGGGCATCTCTTCAGACAATTCCAAGAACAGTGCTGTTTGACAAGAAGACCAGAACTAATTTGCTTCTATGGCCAATAGAAGAAGTAGAAAGCTTAAGACTAAGCAGTGATGAATATGAAGGAGTAGTGGTTAAACCTGGCTCTATTGTGCCACTCAACATTAGCCAAGCAACACAGTTGGACATATTTGCTGAATATGAGATTGAATCGTTGGAATCCAATTGGATTAACAAGGACAATAGTGTAGGTTGTGGAAGAGGTGCTACAGATAGAAGTGCTTTTGGACCATTTGGCCTTCTAGCTATAGCAGATGACACACTTTCTGAACAAACTCCAATTTATTTTCGCCTATCTAATACTACCCGTGGTAGTTCAGACACTTTCTTCTGTGTTGATGAAACAAGCAGATCATCCAAGGCTCCTGAGGTTGCAAAACCAGTTTATGGAACCACAGGAGGGAGAACTGTGATCTCAAGTAGAGTTTATCCAACAGAAGCAATATATGGAGCTGCAAGATTATTTCTATTCAACAATGCAACTGGCATAAACATCAAAGTCTCCCTCAAGATTTGGCAATTGAACTCTGCTTTTATACGCCCCTTTCCCTTTGATCAAAGTCAATGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01820	7074	9857	-

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GH32

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K01193	INV, sacA	EC:3.2.1.26	Galactose metabolism	map00052
			Starch and sucrose metabolism	map00500

Gene Ontology

biological_process
GO:0005975 carbohydrate metabolic process

molecular_function
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001820s00032856.1	PF00251.15	Glyco_hydro_32N	2	182	2.00E-31
Glyur001820s00032856.1	PF00251.15	Glyco_hydro_32N	193	238	3.00E-06
Glyur001820s00032856.1	PF08244.7	Glyco_hydro_32C	304	369	2.80E-06

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.000
SRR1783600	control	0.000
SRR1783602	moderate drought stress	0.000
SRR1811619	moderate drought stress	0.000

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	7.227
DRR006526	Leaf Summer glycyrrhizin high producing strain	7.232

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.013
SRR2868004	Drought Stress (root)	0.000
SRR2967015	Control (root)	0.000

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	7.653
SRR9715740	Leaf	3.120
SRR9715741	Leaf	3.279
SRR9715739	Root	0.000
SRR9715742	Root	0.000
SRR9715743	Root	0.000

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.068
SRR8749028	MeJA induced 9h	0.000
SRR8749029	MeJA induced 9h	0.000
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.000

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.000
SRR8400027	Control - Root	0.000