Gene detail information of Glyur001819s00039497 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_007154567.1 | 1.48E-136 | hypothetical protein PHAVU_003G129700g [Phaseolus vulgaris] |
| trEMBL | tr|V7CCD5|V7CCD5_PHAVU | 6.00E-137 | Uncharacterized protein {ECO:0000313|EMBL:ESW26561.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01819 | 42195 | 43901 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.407 |
| SRR1783600 | control | 2.538 |
| SRR1783602 | moderate drought stress | 1.579 |
| SRR1811619 | moderate drought stress | 1.366 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.093 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.063 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.065 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.064 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.065 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.065 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.326 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.326 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 39.550 |
| SRR2868004 | Drought Stress (root) | 63.966 |
| SRR2967015 | Control (root) | 22.814 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.835 |
| SRR9715740 | Leaf | 0.644 |
| SRR9715741 | Leaf | 4.508 |
| SRR9715739 | Root | 4.946 |
| SRR9715742 | Root | 22.515 |
| SRR9715743 | Root | 20.253 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 74.781 |
| SRR8749028 | MeJA induced 9h | 79.842 |
| SRR8749029 | MeJA induced 9h | 156.858 |
| SRR8749030 | Uninduced | 122.296 |
| SRR8749031 | Uninduced | 58.219 |
| SRR8749032 | Uninduced | 88.748 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.411 |
| SRR8400027 | Control - Root | 17.692 |