Gene detail information of Glyur001815s00041759 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G49000.1 | 2.00E-17 | |
| NR | XP_004513604.1 | 3.70E-62 | PREDICTED: uncharacterized protein LOC101492168 [Cicer arietinum] |
| trEMBL | tr|V7AXG4|V7AXG4_PHAVU | 1.00E-58 | Uncharacterized protein {ECO:0000313|EMBL:ESW10337.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01815 | 618 | 1109 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.904 |
| SRR1783600 | control | 0.936 |
| SRR1783602 | moderate drought stress | 1.360 |
| SRR1811619 | moderate drought stress | 1.235 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.826 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.523 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.024 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.261 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.416 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.575 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.560 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.972 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 18.921 |
| SRR2868004 | Drought Stress (root) | 52.972 |
| SRR2967015 | Control (root) | 33.504 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 20.783 |
| SRR9715740 | Leaf | 16.517 |
| SRR9715741 | Leaf | 20.048 |
| SRR9715739 | Root | 5.274 |
| SRR9715742 | Root | 7.068 |
| SRR9715743 | Root | 6.708 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.614 |
| SRR8749028 | MeJA induced 9h | 3.011 |
| SRR8749029 | MeJA induced 9h | 2.023 |
| SRR8749030 | Uninduced | 4.877 |
| SRR8749031 | Uninduced | 4.657 |
| SRR8749032 | Uninduced | 8.202 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.909 |
| SRR8400027 | Control - Root | 12.060 |