Gene detail information of Glyur001811s00040225 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G29840.1 | 2.00E-52 | alpha/beta-Hydrolases superfamily protein |
| NR | XP_003595193.1 | 1.14E-86 | hypothetical protein MTR_2g039510 [Medicago truncatula] |
| trEMBL | tr|A2Q1D5|A2Q1D5_MEDTR | 4.00E-87 | Uncharacterized protein {ECO:0000313|EMBL:AFK47758.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01811 | 6912 | 13495 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001811s00040225.1 | PF12695.2 | Abhydrolase_5 | 43 | 168 | 2.00E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.831 |
| SRR1783600 | control | 0.966 |
| SRR1783602 | moderate drought stress | 1.717 |
| SRR1811619 | moderate drought stress | 1.617 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.239 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.160 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.306 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.183 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.500 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.474 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.834 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.592 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.492 |
| SRR2868004 | Drought Stress (root) | 3.551 |
| SRR2967015 | Control (root) | 4.352 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.989 |
| SRR9715740 | Leaf | 1.446 |
| SRR9715741 | Leaf | 1.787 |
| SRR9715739 | Root | 0.410 |
| SRR9715742 | Root | 0.790 |
| SRR9715743 | Root | 0.504 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.272 |
| SRR8749028 | MeJA induced 9h | 3.037 |
| SRR8749029 | MeJA induced 9h | 1.767 |
| SRR8749030 | Uninduced | 1.074 |
| SRR8749031 | Uninduced | 1.579 |
| SRR8749032 | Uninduced | 1.439 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.891 |
| SRR8400027 | Control - Root | 4.633 |