Gene detail information of Glyur001809s00037566 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G54140.1 | 1.00E-22 | peptide transporter 1 |
| NR | XP_007133930.1 | 3.76E-108 | hypothetical protein PHAVU_010G004300g [Phaseolus vulgaris] |
| Swissprot | tr|Q9M390|PTR1_ARATH | 6.00E-24 | Protein NRT1/ PTR FAMILY 8.1 |
| trEMBL | tr|V7AK55|V7AK55_PHAVU | 1.00E-108 | Uncharacterized protein {ECO:0000313|EMBL:ESW05924.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01809 | 25771 | 27555 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.837 |
| SRR1783600 | control | 7.854 |
| SRR1783602 | moderate drought stress | 0.550 |
| SRR1811619 | moderate drought stress | 0.550 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 14.568 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 14.408 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.175 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.122 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.124 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.060 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 53.410 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 52.031 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.000 |
| SRR2868004 | Drought Stress (root) | 0.000 |
| SRR2967015 | Control (root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 98.892 |
| SRR9715740 | Leaf | 0.009 |
| SRR9715741 | Leaf | 151.067 |
| SRR9715739 | Root | 0.056 |
| SRR9715742 | Root | 112.824 |
| SRR9715743 | Root | 93.815 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.712 |
| SRR8400027 | Control - Root | 22.393 |