Gene detail information of Glyur001804s00033607 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G05180.1 | 4.00E-27 | |
| NR | XP_004512898.1 | 0 | PREDICTED: restin homolog [Cicer arietinum] |
| trEMBL | tr|A0A072UB28|A0A072UB28_MEDTR | 0 | RAB6-interacting protein, putative {ECO:0000313|EMBL:KEH26984.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01804 | 21637 | 24831 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.979 |
| SRR1783600 | control | 6.107 |
| SRR1783602 | moderate drought stress | 7.335 |
| SRR1811619 | moderate drought stress | 7.296 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.027 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.991 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.843 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.766 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.119 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.185 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.728 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.848 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 31.432 |
| SRR2868004 | Drought Stress (root) | 16.957 |
| SRR2967015 | Control (root) | 20.315 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 10.016 |
| SRR9715740 | Leaf | 9.276 |
| SRR9715741 | Leaf | 8.429 |
| SRR9715739 | Root | 0.525 |
| SRR9715742 | Root | 5.530 |
| SRR9715743 | Root | 4.991 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 45.545 |
| SRR8749028 | MeJA induced 9h | 34.358 |
| SRR8749029 | MeJA induced 9h | 23.103 |
| SRR8749030 | Uninduced | 16.087 |
| SRR8749031 | Uninduced | 7.698 |
| SRR8749032 | Uninduced | 7.838 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 20.995 |
| SRR8400027 | Control - Root | 19.527 |