Gene detail

Gene detail information of Glyur001804s00033606

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G05190.1	1.00E-17	Protein of unknown function (DUF3133)
NR	KHN25796.1	0	Hypothetical protein glysoja_038292 [Glycine soja]
Swissprot	tr\|Q9FHK4\|Y5519_ARATH	3.00E-19	Uncharacterized protein At5g05190
trEMBL	tr\|K7KV03\|K7KV03_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA06G14661.1}

Sequence

Transcript Sequence

>Glyur001804s00033606.1
ATGTCTGGTGAGGTGGTTCCTAAACTTCGGTTGGTTAAATGTCCTAAATGCTGTCAAGTTCTTCCAGAGCCTTCAGAATATGATGTGTACAAGTGTGGTGGATGTGGCACAATTCTTCAAGGTGAAAAATCTAATTTTTGTATAGTACCAATGTACTCTTCAAATGTTATTCAGTTACAAAACACTGCAGAAAAAAATACCAAGAAACGAAATGTGACTGCAAACTCGAAATCAAGTTTACAAGAAACTGATGCAGCTCCTATAAATAGAAAGCATCATGTTCCTCCCCAGGAAGATAGTTTGATGGCAAAAGCAACTACTTCTTCAGGAGAATGTTCTTTGGATGGAAATGTTGGAAGGGGTCAAAATGAAAATGGTGAGTACAATGGCGGTCAGCTTGTACCATTCAAGTTCTCAGATGAAGAACTGGAAAGTGAGTTGGATATCCATAAGTTGTCACTCAGAAGGCATAGAGTGTCCAAGAAAGAGGGTTCAAATAAGATCGCTCACTGTGAGATTGAGGAGATAAATGATGGAAACCTGTCATTAGAAGGACCAAAAGAGGAGTTAATTTGTGCATCAGATGAAGATGGCAACAATGATGTCAAATCAGCTCTATTAGGGGTAAAGTCTGAAATGGAAATTACTGAAAGTAATTTAAGAGGAGAAGAAGAGTTAAATGAAGGAAACTTGTCACTAGAGGGAGCAGATGATGAGTTAATTTCTGGATCAGGTGGAGAAGATGCCAATAAAGAAAAGTCTGAGGTGGAAATCATTGGAGGTGACTTAGAAGGAGTAAATAATGGCAATGTGTTACTAGAAAATGCAGAAGAGGAGTTGATTTCTGGATTGGATGGAGAAGATGCTAATAATGAAAAATCAGTTCTAGTTGGTGAAAACCTTGAAGTGGAAATTACTGGAAACAATACAGCAGGAGAAGAGTTGAATAATGGAAAATTGTTATCAGAGGGAGCAGAAAAGGAGTTACATATACGTGCACTGGAAGGAGAAGATCCCAACAATGACCAATCAGCAATAGCAGATGCAAAATCAGAAGTGGACACTACAGAAAGTGCTTCTACTACTAAAAAGCCAAGCACTGAGAAGGGAAGCATTTTACGTGTTACTCCTGGTAAACTTGAAGAAGGTGGTACATCTGATAATCCTGTATCTCCTTCTAATAAACATCAGAAGCAAGCCCAGAAGAATATTCACCGTAGCTCTGACCGTGTAATGTCTGTGGATAGATTAAATACCACAGAATTAAGCGATCACAGTTCAGAGCTTGGTGGTGTTCTTGGAAAATTGTCTAAATCCCCAACCACTAGAAGCTCTTTTGCTTATGATGGAAGCCTCTGTTCTCATGATGGAGTGGATGAGCGAGTTTTGAAGAATGCTTACACCATTGCTGACAGAAGGACCAGAAAGGGTAAAGGCCTTGCTAATAGCTTGTCATATGGAGATCCTGAAACACAACATCAATCACATATGCCCAATGAAAAGCATCATGTCATGAAAGAAAGCAGAAGGAATCAAAACAAAGTGTTGGAGACTACATGGCATGGTAATCCACATTGGATGAGAACAAAGAGAGATGAGTTTCCNCCCAGAATGCCTTTCCATCGAAGTGGTTCCCAATCTCACTATGAGAGTGGCAGGCCATCAAATAGAATGCATGATGAGCTCTACAGCAGCCCAAGCTTTCTTTCACATGACCCTCGTGAGGATACTGACCAGGAGAAGATGAAACTGTTGAGAATGATTCATAAGTTGCAGGGTCAACTCAACAAGACTCGCTATATGAGTGGGGAAACAAATGGAAGACTGTCCACAGGTGTATCTTACAAGGGAAATCATATTTCTGCATATCATAGCCACGACCTTCATGAGGGAAGGTTTTCTCATGCTCAGAATCATCCTAGGTGTAATGGAAGGTGTAGTCATGGATGGCACCAAAGGCATAAATACTCACGGAATCCTTATTCAGCTGAGGCAACAAGCAGTGCACCCCATGTTGATCATTCTTGTTTCCACTGCTATCCCCATGTCTCAGCGGATTCGCCTCCACGTGTTCTTTTTCAATATGAAGATTCATATGGGTCCTATCCAAGGCAAGATTATTGCTCATCTCACNGCTCTTATTCTTCAAGTCCACAATGGTTCACAGCCTCTAAACTCCCATTATATGGCAATGAAACAAAATCTGATGATCAAAGGCATAGGGCTCATGAGGTGAGGAAATATTCGAGGGAGAAACTGAACTTGGCTAAGAGACATCACAGGCCAGTGGCAGGTGGAGCTCCTTTTGTCACTTGTCATAAATGTTTACAGCTGCTGCATCTGCCTGCAGATTTTCTCCTTTATAATAAAAGGGCATGTCATAAGCTGAAATGTGGTGAATGTTCAGAGGTGCTCAAGTTTTCACTGAAGAATGGAAGTCATATAGTTTCTTTTTCACCAAATGCTATAGGCCTTCCATCATCAAGTGAGCTTAATGATCAAAACGAGGTGATTAGTAGCAGTCTACTACCATCAACTTCTCATGCCAACTATTACCAATATTCANCCTCAGAACCCATTTCATATTATGAGGATTATGGGCCTTCTGTCTCTCAAAGCTACTCCTCAGAAGGGGATCCTGTTTTTCTGACACAATTCCATCCCTTACATGGCAGTGAATATGGTAACGCAAGTGCCTCTCATGGTACATTTGAGCCTATAGCAGAGAAAAAGATTGCTTCAAGATATTCTAGTACAACCAAGGCTCCAATGGAGACAGATGAATCAGCTGACTTTTCCTCCAATATGTCTGGTTCTAGGAAAGTGTCAGCAGAAATGGTGGTAAGGCCACAGCCAAAAAGTTCATCACTTCTTAAACTGATGGGTTATTCTACACTAAGTCAAGTGATAAGAGGGAGCTCATACTCAGTTGAGAAAATGATCCGAATCAAGAAAGAGAGCCATAATTCTCAACAGAACTGA

Protein Sequence

>Glyur001804s00033606.1
MSGEVVPKLRLVKCPKCCQVLPEPSEYDVYKCGGCGTILQGEKSNFCIVPMYSSNVIQLQNTAEKNTKKRNVTANSKSSLQETDAAPINRKHHVPPQEDSLMAKATTSSGECSLDGNVGRGQNENGEYNGGQLVPFKFSDEELESELDIHKLSLRRHRVSKKEGSNKIAHCEIEEINDGNLSLEGPKEELICASDEDGNNDVKSALLGVKSEMEITESNLRGEEELNEGNLSLEGADDELISGSGGEDANKEKSEVEIIGGDLEGVNNGNVLLENAEEELISGLDGEDANNEKSVLVGENLEVEITGNNTAGEELNNGKLLSEGAEKELHIRALEGEDPNNDQSAIADAKSEVDTTESASTTKKPSTEKGSILRVTPGKLEEGGTSDNPVSPSNKHQKQAQKNIHRSSDRVMSVDRLNTTELSDHSSELGGVLGKLSKSPTTRSSFAYDGSLCSHDGVDERVLKNAYTIADRRTRKGKGLANSLSYGDPETQHQSHMPNEKHHVMKESRRNQNKVLETTWHGNPHWMRTKRDEFPPRMPFHRSGSQSHYESGRPSNRMHDELYSSPSFLSHDPREDTDQEKMKLLRMIHKLQGQLNKTRYMSGETNGRLSTGVSYKGNHISAYHSHDLHEGRFSHAQNHPRCNGRCSHGWHQRHKYSRNPYSAEATSSAPHVDHSCFHCYPHVSADSPPRVLFQYEDSYGSYPRQDYCSSHXSYSSSPQWFTASKLPLYGNETKSDDQRHRAHEVRKYSREKLNLAKRHHRPVAGGAPFVTCHKCLQLLHLPADFLLYNKRACHKLKCGECSEVLKFSLKNGSHIVSFSPNAIGLPSSSELNDQNEVISSSLLPSTSHANYYQYSXSEPISYYEDYGPSVSQSYSSEGDPVFLTQFHPLHGSEYGNASASHGTFEPIAEKKIASRYSSTTKAPMETDESADFSSNMSGSRKVSAEMVVRPQPKSSSLLKLMGYSTLSQVIRGSSYSVEKMIRIKKESHNSQQN

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01804	13771	17053	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001804s00033606.1	PF11331.3	DUF3133	764	809	8.90E-18

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.060
SRR1783600	control	0.061
SRR1783602	moderate drought stress	0.075
SRR1811619	moderate drought stress	0.051

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	3.053
DRR006520	Root Summer glycyrrhizin high producing strain	2.990
DRR006521	Root Winter glycyrrhizin high producing strain	0.262
DRR006522	Root Winter glycyrrhizin high producing strain	0.219
DRR006523	Root Summer glycyrrhizin low producing strain	2.069
DRR006524	Root Summer glycyrrhizin low producing strain	1.967
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.532
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.519

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.377
SRR2868004	Drought Stress (root)	0.999
SRR2967015	Control (root)	0.786

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	6.592
SRR9715740	Leaf	4.765
SRR9715741	Leaf	8.926
SRR9715739	Root	1.574
SRR9715742	Root	13.516
SRR9715743	Root	13.339

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	10.042
SRR8749028	MeJA induced 9h	8.199
SRR8749029	MeJA induced 9h	6.373
SRR8749030	Uninduced	33.403
SRR8749031	Uninduced	2.250
SRR8749032	Uninduced	4.539

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.821
SRR8400027	Control - Root	2.363