Gene detail information of Glyur001804s00033604 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G05220.1 | 9.00E-15 | |
| NR | XP_003526794.1 | 4.00E-39 | PREDICTED: uncharacterized protein LOC100775497 [Glycine max] |
| trEMBL | tr|I1KB66|I1KB66_SOYBN | 1.00E-39 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G14680.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01804 | 8343 | 8846 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.259 |
| SRR1783600 | control | 5.022 |
| SRR1783602 | moderate drought stress | 5.284 |
| SRR1811619 | moderate drought stress | 5.587 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.367 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.455 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 305.223 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 297.776 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.572 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.937 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.103 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.904 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.194 |
| SRR2868004 | Drought Stress (root) | 8.106 |
| SRR2967015 | Control (root) | 7.910 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 73.582 |
| SRR9715740 | Leaf | 8.794 |
| SRR9715741 | Leaf | 74.712 |
| SRR9715739 | Root | 14.190 |
| SRR9715742 | Root | 11.186 |
| SRR9715743 | Root | 9.445 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 57.174 |
| SRR8749028 | MeJA induced 9h | 157.927 |
| SRR8749029 | MeJA induced 9h | 228.892 |
| SRR8749030 | Uninduced | 166.051 |
| SRR8749031 | Uninduced | 143.709 |
| SRR8749032 | Uninduced | 254.046 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 32.987 |
| SRR8400027 | Control - Root | 26.784 |