Gene detail

Gene detail information of Glyur001790s00032819

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G69020.1	0	Prolyl oligopeptidase family protein
NR	XP_003614332.1	0	Prolyl endopeptidase-like protein [Medicago truncatula]
COG	NP_923075.1	3.00E-123	oligopeptidase [Gloeobacter violaceus PCC 7421]
trEMBL	tr\|G7JZA5\|G7JZA5_MEDTR	0	Prolyl oligopeptidase family protein {ECO:0000313\|EMBL:AES97290.1}

Sequence

Transcript Sequence

>Glyur001790s00032819.1
ATGGCAATGGCACTCCGCACCCTCCTTCGTCTCACTCACTTCTACACCAAACCCGCACTCACCACTAGAACATCCCACACCACGCACTCTTCATGCCGCCGCNTCCTCCCTTCGGCGCCGCCACAAGCTCCGCCGTCGGCGAAGAAGGTCCCATTCACGGTGTCAGTACACGGCAGGAGGTGGGAGGACCCATACCACTGGATGTCGAACACGGAGGACCCGCACCTGTTGGAGCATCTCAACCGCGAGAACAGCTACGNCGATGCCTTCATGGCCGACACCCTCAAACTCCGCTCNAACCTGTCCTCCGAGATGAAGACCCGATTACCACCCTCCATTTCCACTCCCCNTGAGCGTTGGCCACCCTGGCTATATTACGAGTACATTCCAGAGGGAAAGGAATATCCTGTGCTGTGTAGGAAGCTTGAAACAGAGACAAGTGGTTGGCTGAAGGCTATTTTGCTTCGCCATGGAATGGCAAGACCAGAAAGGGAGGAGGTTTTGCTTGACTGGAATGAACTCGCAGAGAAATATGGCAATATAGTCAATACTACAGGGTATGTCCACGTGGGAACATGTAGAGTTTCACCTGACCACAACTACCTTGCGTACACTGTTGATATTTCTGGTGGCGAACGGTTTATGCTTCAGGTTAAAGACCTCAGAAGTGGATTAATGGACCCAAAATTAGAAGTTGATGGTGTTGTTAGCTTGGCATGGGGTCGAGATGCAAGTTATCTGTTCTATACACTGTCAGATGAAAACCAGCGACCTTACAGGCAAAATATTATAATTGGATTTTCGTGTTGTTGGTTTTTTGGAATTAAAAAAGGGAATGGGGTTCTCTGCAGAAAACTTGGATATGATCATGTGAATGATGTCCCGGTATTTACTGAAAGCGACTCCAGTTTTTGTGTGGACATAACAAGCACAAAGGATGGCAAGTTCATAACTGTTTTTGTTATAGATTCGGCCAATCCAATGGATGGTTTACAAAGAATATGTAAACGTACTTCTGGTGTACAGTACTTTGTGGAACATCACTATGGTTTTTTTTATATCCTTACCAATGCTCCTTTGCCTAATGGTCAATGGTCTAGTGAAGATTATTACCTTGTTAGATGCCGAGTTGAAGATATAGAGTCAGCTAAATTGCAGAATATCATCCTTCCTGATAAAGATATGAGTCTATGTGATATGGACATCTTTAATGGACATCTGGTTCTTTTCCTCAATAAGAAAGGTCTTCCTTTGTTATGTTCCTTGAACTTTCCCATCCAAATTGATTTCAAGAATCAAGTATATATTCAAGACCTGAAACCGTGGTACTTTCCTCTGCCATCAAATACATGCAGTGCCGTTCCTGGTTCAAATCATGACTTCTTGAATACAGTTTACCGTGTGGTTCTTTCATCACCTGTGATGCCAGATATAATTGTTGATTATGACATATCAAGACATACATATTCAATTGTGCATCAAGAGGAAGTGAATTGTGATTCTGTTAGTCAGTCACGCATACCAACTTTTGAGCTAAATGAGAATAAAATTCAAGGGGCACATAGTGGTAACAAAGAGTGTGCCACAAATTCTGATTCACAGAGATGGAAGGATTCTTCTGAAGTATACTGTTGTCAGAGGGAGGAAGTTATTTCCCATGATGGTGTAAGAGTTCCACTAACCATTGTGTACTCTAGAGAATCCTGGCAAAAGGGTCAATACCCAGGACTTTTAGTAGGCTATGGAGCATATGGAGAAGATCTTGATAAGAGCTGGTGTTCAGATCGCCTGAGTTTATTGGACCGTGGTTGGGTAGTGGCATTCGCTGATGTAAGAGGTGGTGGTGGTGGAGGTCGTTCGTGGCATAAATCGGGGAGTGGATTAAACAAACACAATTCAATATTTGACTTCGTATCTTGTGGCAACTACCTGGTTAATGAGGGTTATGTCCACAAAGACCAGCTTGGTGCTATTGGATGGAGTGCAGGCTGCCTTCTTGTTGGTGCAGCTATGAATATGTATCCACAACTCTTTCGTGCTGCCATATTGAAGGTACCATTTCTTGATGTATGCAACACGTTGTTGGATCCCAGTCTGCCCCTCACAATACTGGATTATGAAGAATTTGGAAATCCTCAAATACAGTTGAACTTCGATTCTATTTTTAGTTATTCTCCTTANGACAACATTCCTCAAGGCAGTTGCTTTCCTTCAGTTATGGTTACAGCTGCAGTTAATGATTCAAGGCAATCTCACTATCGCCAATCATCTATTAGATTTGCTTCAAAGAGGGTTGGAGTTTGGGAAGGTGCTAAGTGGGTAGCTAAAGTAAGAGATAGTACCTGCTCACGTTGTTCTCGTACTGTCATCATGAAAACGAGTATGATAGGAGGGCATTTTGGTGAAGGCGGTCGCTATGCTCAATGCGACGAAACAGCTTATGAGTATGCTTTCCTCATGAAAGCTTTTGGAATGCCAGCTGTTGCAAAGTCGCGTGCAGTTGATGGAGTCATGACTCATGGTGCAATGCAAAAGCCCGAAACACAGTCGCCTGACTTATGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01790	11443	21487	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006508 proteolysis

molecular_function

GO:0004252 serine-type endopeptidase activity

GO:0008236 serine-type peptidase activity

GO:0070008 serine-type exopeptidase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001790s00032819.1	PF02897.10	Peptidase_S9_N	44	434	6.10E-49
Glyur001790s00032819.1	PF00326.16	Peptidase_S9	595	824	8.60E-41

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	6.541
SRR1783600	control	6.520
SRR1783602	moderate drought stress	10.282
SRR1811619	moderate drought stress	10.234

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	6.694
DRR006520	Root Summer glycyrrhizin high producing strain	6.644
DRR006521	Root Winter glycyrrhizin high producing strain	2.873
DRR006522	Root Winter glycyrrhizin high producing strain	3.029
DRR006523	Root Summer glycyrrhizin low producing strain	5.922
DRR006524	Root Summer glycyrrhizin low producing strain	6.283
DRR006525	Leaf Summer glycyrrhizin high producing strain	4.344
DRR006526	Leaf Summer glycyrrhizin high producing strain	4.211

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	7.634
SRR2868004	Drought Stress (root)	8.072
SRR2967015	Control (root)	9.082

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	3.438
SRR9715740	Leaf	4.290
SRR9715741	Leaf	2.210
SRR9715739	Root	0.819
SRR9715742	Root	2.700
SRR9715743	Root	2.318

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	11.138
SRR8749028	MeJA induced 9h	8.538
SRR8749029	MeJA induced 9h	6.477
SRR8749030	Uninduced	1.216
SRR8749031	Uninduced	0.695
SRR8749032	Uninduced	1.516

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	15.401
SRR8400027	Control - Root	15.867