Gene detail information of Glyur001789s00033167 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G54310.2 | 6.00E-18 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| NR | XP_003531813.1 | 4.33E-24 | PREDICTED: uncharacterized protein LOC100796633 [Glycine max] |
| COG | YP_004267688.1 | 1.00E-11 | methyltransferase type 11 [Planctomyces brasiliensis DSM 5305] |
| trEMBL | tr|I1KW47|I1KW47_SOYBN | 2.00E-24 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G25420.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01789 | 23054 | 25551 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.239 |
| SRR1783600 | control | 2.462 |
| SRR1783602 | moderate drought stress | 1.454 |
| SRR1811619 | moderate drought stress | 1.517 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.590 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.240 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.432 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.720 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.089 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.203 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.014 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.086 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.112 |
| SRR2868004 | Drought Stress (root) | 9.615 |
| SRR2967015 | Control (root) | 7.006 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.896 |
| SRR9715740 | Leaf | 1.630 |
| SRR9715741 | Leaf | 3.227 |
| SRR9715739 | Root | 1.332 |
| SRR9715742 | Root | 1.608 |
| SRR9715743 | Root | 1.302 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.323 |
| SRR8749028 | MeJA induced 9h | 3.906 |
| SRR8749029 | MeJA induced 9h | 1.440 |
| SRR8749030 | Uninduced | 3.400 |
| SRR8749031 | Uninduced | 2.230 |
| SRR8749032 | Uninduced | 2.637 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.018 |
| SRR8400027 | Control - Root | 5.552 |