Gene detail information of Glyur001788s00041172 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G15780.1 | 1.00E-07 | |
| NR | XP_003531713.2 | 1.40E-44 | PREDICTED: uncharacterized protein LOC100788011 isoform X1 [Glycine max] |
| trEMBL | tr|I1KVE8|I1KVE8_SOYBN | 5.00E-45 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G22650.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01788 | 8372 | 9999 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 28.384 |
| SRR1783600 | control | 28.823 |
| SRR1783602 | moderate drought stress | 41.778 |
| SRR1811619 | moderate drought stress | 41.644 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 23.379 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 23.085 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 30.606 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 30.043 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 34.550 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 34.474 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 57.739 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 57.383 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.010 |
| SRR2868004 | Drought Stress (root) | 15.070 |
| SRR2967015 | Control (root) | 13.787 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.420 |
| SRR9715740 | Leaf | 12.535 |
| SRR9715741 | Leaf | 7.917 |
| SRR9715739 | Root | 4.260 |
| SRR9715742 | Root | 4.909 |
| SRR9715743 | Root | 2.808 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 15.268 |
| SRR8749028 | MeJA induced 9h | 13.846 |
| SRR8749029 | MeJA induced 9h | 14.789 |
| SRR8749030 | Uninduced | 11.976 |
| SRR8749031 | Uninduced | 14.796 |
| SRR8749032 | Uninduced | 15.379 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.381 |
| SRR8400027 | Control - Root | 12.824 |