Gene detail information of Glyur001784s00038158 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G19090.1 | 6.00E-117 | Protein of unknown function (DUF630 and DUF632) |
| NR | KHN15320.1 | 0 | hypothetical protein glysoja_026615 [Glycine soja] |
| trEMBL | tr|K7MBS2|K7MBS2_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G17710.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01784 | 1345 | 6422 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001784s00038158.1 | PF04783.7 | DUF630 | 1 | 59 | 1.00E-25 |
| Glyur001784s00038158.1 | PF04782.7 | DUF632 | 359 | 673 | 7.30E-84 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 11.258 |
| SRR1783600 | control | 11.410 |
| SRR1783602 | moderate drought stress | 12.839 |
| SRR1811619 | moderate drought stress | 12.719 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.092 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.075 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.738 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.741 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.685 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.797 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.605 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.795 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.975 |
| SRR2868004 | Drought Stress (root) | 7.774 |
| SRR2967015 | Control (root) | 9.138 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.423 |
| SRR9715740 | Leaf | 1.603 |
| SRR9715741 | Leaf | 1.998 |
| SRR9715739 | Root | 4.699 |
| SRR9715742 | Root | 14.458 |
| SRR9715743 | Root | 12.808 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.193 |
| SRR8749028 | MeJA induced 9h | 0.999 |
| SRR8749029 | MeJA induced 9h | 1.289 |
| SRR8749030 | Uninduced | 0.421 |
| SRR8749031 | Uninduced | 0.459 |
| SRR8749032 | Uninduced | 0.357 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 16.000 |
| SRR8400027 | Control - Root | 19.139 |