Gene detail information of Glyur001780s00035660 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G29300.1 | 6.00E-113 | Plant protein of unknown function (DUF641) |
| NR | XP_007159484.1 | 0 | hypothetical protein PHAVU_002G241300g [Phaseolus vulgaris] |
| trEMBL | tr|V7CQ35|V7CQ35_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW31478.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01780 | 8082 | 9473 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001780s00035660.1 | PF04859.7 | DUF641 | 75 | 205 | 9.80E-42 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.557 |
| SRR1783600 | control | 9.528 |
| SRR1783602 | moderate drought stress | 3.115 |
| SRR1811619 | moderate drought stress | 3.267 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.519 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.443 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.008 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.016 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.735 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.668 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.381 |
| SRR2868004 | Drought Stress (root) | 4.029 |
| SRR2967015 | Control (root) | 7.570 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.802 |
| SRR9715740 | Leaf | 1.326 |
| SRR9715741 | Leaf | 1.035 |
| SRR9715739 | Root | 1.535 |
| SRR9715742 | Root | 1.793 |
| SRR9715743 | Root | 1.631 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.950 |
| SRR8749028 | MeJA induced 9h | 4.108 |
| SRR8749029 | MeJA induced 9h | 0.941 |
| SRR8749030 | Uninduced | 1.100 |
| SRR8749031 | Uninduced | 0.091 |
| SRR8749032 | Uninduced | 0.239 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.952 |
| SRR8400027 | Control - Root | 7.529 |