Gene detail information of Glyur001778s00033619 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G51180.2 | 5.00E-139 | alpha/beta-Hydrolases superfamily protein |
| NR | XP_003589853.1 | 0 | hypothetical protein MTR_1g040460 [Medicago truncatula] |
| trEMBL | tr|G7IDH3|G7IDH3_MEDTR | 0 | Serine esterase family protein {ECO:0000313|EMBL:AES60104.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01778 | 41396 | 50134 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001778s00033619.1 | PF05057.9 | DUF676 | 27 | 249 | 3.40E-67 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 12.963 |
| SRR1783600 | control | 13.035 |
| SRR1783602 | moderate drought stress | 12.764 |
| SRR1811619 | moderate drought stress | 12.812 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 19.545 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 19.482 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 65.923 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 64.679 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 20.575 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 20.732 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.858 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.812 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 15.878 |
| SRR2868004 | Drought Stress (root) | 17.909 |
| SRR2967015 | Control (root) | 18.104 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 12.032 |
| SRR9715740 | Leaf | 11.354 |
| SRR9715741 | Leaf | 16.409 |
| SRR9715739 | Root | 3.276 |
| SRR9715742 | Root | 11.061 |
| SRR9715743 | Root | 9.207 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 19.723 |
| SRR8749028 | MeJA induced 9h | 24.840 |
| SRR8749029 | MeJA induced 9h | 24.618 |
| SRR8749030 | Uninduced | 32.041 |
| SRR8749031 | Uninduced | 70.601 |
| SRR8749032 | Uninduced | 50.961 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 18.881 |
| SRR8400027 | Control - Root | 20.973 |