Gene detail information of Glyur001778s00033615 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | AFK37508.1 | 1.20E-23 | unknown [Lotus japonicus] |
| Swissprot | tr|Q9FKG1|EF104_ARATH | 8.00E-08 | Ethylene-responsive transcription factor ERF104 |
| trEMBL | tr|I3SB66|I3SB66_LOTJA | 4.00E-24 | Uncharacterized protein {ECO:0000313|EMBL:AFK37508.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01778 | 24252 | 25151 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 45.869 |
| SRR1783600 | control | 46.518 |
| SRR1783602 | moderate drought stress | 51.309 |
| SRR1811619 | moderate drought stress | 51.196 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 657.836 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 641.379 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 11.981 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 12.521 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 652.736 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 645.590 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 122.537 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 126.825 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 26.216 |
| SRR2868004 | Drought Stress (root) | 114.871 |
| SRR2967015 | Control (root) | 339.528 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 42.464 |
| SRR9715740 | Leaf | 165.548 |
| SRR9715741 | Leaf | 79.914 |
| SRR9715739 | Root | 172.250 |
| SRR9715742 | Root | 161.978 |
| SRR9715743 | Root | 150.558 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 96.701 |
| SRR8749028 | MeJA induced 9h | 66.728 |
| SRR8749029 | MeJA induced 9h | 46.786 |
| SRR8749030 | Uninduced | 6.446 |
| SRR8749031 | Uninduced | 1.949 |
| SRR8749032 | Uninduced | 5.184 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 98.048 |
| SRR8400027 | Control - Root | 243.608 |