Gene detail

Gene detail information of Glyur001777s00043382.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G01550.1	5.00E-166	lectin receptor kinase a4.1
NR	XP_003522051.1	0	PREDICTED: probable L-type lectin-domain containing receptor kinase VI.1-like [Glycine max]
COG	YP_004571825.1	5.00E-26	serine/threonine protein kinase [Microlunatus phosphovorus NM-1]
Swissprot	tr\|Q9M020\|LRK63_ARATH	0	Lectin-domain containing receptor kinase VI.3 (Precursor)
trEMBL	tr\|I1JL89\|I1JL89_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA03G06580.1}

Sequence

Transcript Sequence

>Glyur001777s00043382.1
ATGGCTACAAAAACTCTCTATGCTTTCCTCATCCTTGCCATTCTCCTAGTTGCTGCCAATGCTTTAGTCTTCCAATTTCCTGGATTCAATAACAATGAAGCCAATCTCACCCTTGATGGAGCTTCCAAACTTGTCAAACCCCAAGGTATACTTAAGCTCACCAACAGAATTAACAACATCAAAGGCCATGCATTCTATAACAAACCCATTGAAATGCTTGAGAAGAAAACAGACTCTTCTTCTTCTTCTTCACTACACCCAAAAAATGTTTCTTCCTTCAGTACATGCTTTGTCTTCTCAATTGTATCACCAAGCTCTAGCCCTGGTGGTTTCGGTCTTGCCTTCACCATATCTCCCTCACCACAATTCCCAGGAGCTTCTGCTGGCCACTATCTTGGTATCTTAAACTCTTCCAATGAAAATGACTCCTCAAATCACATCTTTGCTGTGGAATTTGACACAGTGAATGGCCACAAAGATGAGTCTGATACAGAAGGAAACCATGTTGGTGTGAATCTGAATAGCATGATTTCAGAAACATCTAAACCAGCAGCTTACACTGAAGAAGGCACAGATGAAAATGAAGATTTCAACATGGAGGAGGCTATCGCTGTCCAAGCTTGGATAGAATATGATGGTGAAACAGGAATCTTGAATGTAACAGTCGCCCCTTTATCAGTACCAAGACCCAAAAAACCACTCATATCTGAGGCAATTGACCTCAGTTCTGTTATGAAAGAAACCATGTATGTTGGTTTCTCAGCCTCAACAGGTGAAAGGAAAGCAAGCTCCCATTATATTCTAGGATGGAGCTTTGCATTGAATGAAGTTGCCCCTTCATTCACTGCCTCACAGCTTCCAAAGCCACCACCAAAGGAGAAAAGTCCACACTCCTTTCCATGGGTCAAGGTTGCAATTGGAATCTTTTCTGTTTTGGCCTTTACCTCTTTATGTCTCTTATTCTTTATGGCACTCTATAAGAGATATATGCAATTTGAAGCTCTTGAGGATTGGGAGCAAGATTGTCCTCACAGGTTCAGATATAGAGATCTTCACATTGCAACAAAGGGGTTTGAAGAGAGGCAATTGATTGGAGTTGGAGGGTTTGGTTCTGTATACAAAGGTGTCTTACCAACAACAGGAACTGAGGTTGCTGTTAAAAGGATCATGAGGAGTCCAACAATGCAGGGAATGAGGGAATTTGCAGCTGAGATTGAAAGCTTAGGAAGATTGAGGCACAAGAATTTGGTAAATCTTCAAGGGTGGTGTAAGAACAAGAATGATCTACTCCTAATCTATGATTACATTCCAAATGGTAGCCTTGACTCTCTTTTATATAATTTTGGAAAGGAAAGTTTTTTGGCTTTGGATTGGGACCAAAGGTTCAATATTCTCAAAGGGGTAGCTGCTGGGCTATTGTATCTTCACGAGGAGTGGGAACAAGTGGTGATCCATAGAGATGTGAAATCTAGCAACATTCTAATAGATGGGGACTTGAATTCCCATTTAGCTGATTTTGGACTAGCAAGGCTATATAATCATCATGATCAAGTTTCACACACTACTAGTGTTGTTGGCACAATTGGGTATATGGCACCAGAGTTAACTAGGACAGGAAAAGCATCTACAAGCTCTGATGTGTATGCATATGGGGTTCTACTCCTTGAAGTTGTTGCTGGGAAAAGACCTGTTGTTGGGTCTGGTCAATTTTTCTTGGTGGATTGGGTTGTTGAGAATCACCAACTTGGTCAAATTCTTGAAGTGGTTGATCCTAAGATGGGTTTAGTTTATGATGAGGAAGAGGTGGAGTTGGTTCTCAAGTTGGGTCTACTTTGCACTCAAGACAAAGCTGACTATAGACCAACCATGAAACAAGTAACTAGGTACCTAAATTTTGATGACCCTCTTCCTGTTGTTGATTGGAGACACTATGATTCTCAGAGTAGTAGAAGAACGAGCTCAAGTTTTCTGGAAGCCATGTCTACGACTACGATTACAAGTAGGACTACATCCTCATATAGTTTATCCTCCATTGGCAAGAGTACATTAATGTCTATAGAAACTAGTAGATAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01777	27433	29505	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.11.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

GO:0030246 carbohydrate binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001777s00043382.1	PF00139.14	Lectin_legB	22	272	1.90E-75
Glyur001777s00043382.1	PF00069.20	Pkinase	359	577	2.30E-49

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.000
SRR1783600	control	0.000
SRR1783602	moderate drought stress	0.037
SRR1811619	moderate drought stress	0.036

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.052
DRR006520	Root Summer glycyrrhizin high producing strain	0.052
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.160
DRR006524	Root Summer glycyrrhizin low producing strain	0.160
DRR006525	Leaf Summer glycyrrhizin high producing strain	9.583
DRR006526	Leaf Summer glycyrrhizin high producing strain	9.595

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.324
SRR2868004	Drought Stress (root)	0.373
SRR2967015	Control (root)	0.627

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	6.022
SRR9715740	Leaf	5.798
SRR9715741	Leaf	8.210
SRR9715739	Root	0.024
SRR9715742	Root	0.134
SRR9715743	Root	0.089

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.000
SRR8749029	MeJA induced 9h	0.000
SRR8749030	Uninduced	0.052
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.000

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.043
SRR8400027	Control - Root	0.066