Gene detail information of Glyur001776s00029318 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G13840.1 | 8.00E-154 | Polymerase/histidinol phosphatase-like |
| NR | XP_004504779.1 | 0 | PREDICTED: protein TrpH-like [Cicer arietinum] |
| COG | YP_003318964.1 | 2.00E-55 | PHP domain-containing protein [Sphaerobacter thermophilus DSM 20745] |
| trEMBL | tr|I1KR42|I1KR42_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G07850.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01776 | 43689 | 48045 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001776s00029318.1 | PF02811.14 | PHP | 85 | 283 | 4.50E-21 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.276 |
| SRR1783600 | control | 4.257 |
| SRR1783602 | moderate drought stress | 3.245 |
| SRR1811619 | moderate drought stress | 3.319 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.307 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.318 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.888 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.797 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.848 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.680 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.915 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.811 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 23.836 |
| SRR2868004 | Drought Stress (root) | 19.520 |
| SRR2967015 | Control (root) | 18.886 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 12.195 |
| SRR9715740 | Leaf | 14.897 |
| SRR9715741 | Leaf | 11.941 |
| SRR9715739 | Root | 8.495 |
| SRR9715742 | Root | 8.725 |
| SRR9715743 | Root | 7.923 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 14.869 |
| SRR8749028 | MeJA induced 9h | 5.014 |
| SRR8749029 | MeJA induced 9h | 7.895 |
| SRR8749030 | Uninduced | 5.971 |
| SRR8749031 | Uninduced | 1.837 |
| SRR8749032 | Uninduced | 2.651 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.753 |
| SRR8400027 | Control - Root | 12.332 |