Gene detail information of Glyur001776s00029315 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G64170.2 | 4.00E-18 | dentin sialophosphoprotein-related |
| NR | XP_004504783.1 | 7.58E-107 | PREDICTED: dentin sialophosphoprotein-like isoform X1 [Cicer arietinum] |
| trEMBL | tr|I1KUD9|I1KUD9_SOYBN | 8.00E-102 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G19150.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01776 | 25305 | 28589 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.182 |
| SRR1783600 | control | 2.078 |
| SRR1783602 | moderate drought stress | 2.703 |
| SRR1811619 | moderate drought stress | 2.694 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.390 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.635 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 11.666 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.692 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.241 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.150 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 11.205 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 11.594 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.080 |
| SRR2868004 | Drought Stress (root) | 10.117 |
| SRR2967015 | Control (root) | 6.807 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 18.186 |
| SRR9715740 | Leaf | 20.957 |
| SRR9715741 | Leaf | 26.008 |
| SRR9715739 | Root | 0.070 |
| SRR9715742 | Root | 4.001 |
| SRR9715743 | Root | 2.782 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.833 |
| SRR8749028 | MeJA induced 9h | 12.997 |
| SRR8749029 | MeJA induced 9h | 4.571 |
| SRR8749030 | Uninduced | 4.587 |
| SRR8749031 | Uninduced | 6.423 |
| SRR8749032 | Uninduced | 3.321 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.450 |
| SRR8400027 | Control - Root | 2.090 |