Gene detail

Gene detail information of Glyur001776s00029306

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G33530.1	8.00E-110	K+ uptake permease 5
NR	XP_003531033.1	0	PREDICTED: potassium transporter 7-like [Glycine max]
COG	YP_003387785.1	2.00E-29	K potassium transporter [Spirosoma linguale DSM 74]
Swissprot	tr\|Q8LPL8\|POT13_ARATH	1.00E-129	Potassium transporter 13
trEMBL	tr\|K7L5D9\|K7L5D9_SOYBN	0	Potassium transporter {ECO:0000256\|RuleBase:RU321113}

Sequence

Transcript Sequence

>Glyur001776s00029306.1
CCGCTCCAACGCATCCGATCCAGTGATCCATCCATCATCTATCGTCAATCAATTATTATTCAATTCAAAGGAGAAAGAAAGAGAAACAATGTCTGTCCTGTTCCTGAGTATTTCAAAATAGATTCCGGAGGCAGCTTTGATTCCTCGGCACGTGAAAATTCCCGCTTGCCAATTGCCAAAGCACAACACAGCACCCACATAACACACANAGAGATTAATAAAGGAAAACGAAAAGGAAACTGAAAGGGGGGTTTTATTCGTAGACGGGGCACATCACATCCATAGCATATTGCAGTTGTTGATCAATTCAGCATTCCTTTGGAAAATTCAGTTACGACTCAGCACTGACACTGCATTCATCCTCTGCCTATTGTAATTTGTAATCAAATTTTCGTGTTTCCGATGGCAAACCCTAAAAGGGGGCATTTATTGGGTGTGGGAGAGGAATATGTGGATCCCGCCGAGAGAGCATTGTCGGTGGACTCCACCGAATCCAGGTGGGTTTTCCAGGAGGACGACGACGACGCCCCCTCCGAGATCGAGGACTTCGATGCCTCTGACTTGCGCCACCAATCCATGTTCGATTCCGATGACGAGGATAATGCCGACCAGAGGCTCGTTCGCACTGGCCCACGNATCGATTCCTTCGACGTTGAAGCTCTCGAGGTTCCCGGTGCTCATAGAAATGACTACGAGGATGTCAGCGTGGGAAAGAGAATTGTGTTGGCTTTTCAAACACTTGGTATTGTCTTTGGTGATGTTGGGACAAGTCCATTGTATACTTTCAGTGTTATGTTTAGGAAGGCTCCTATTAATGAAAATGAAGACATTCTCGGGGCATTGTCACTTGTCCTCTACACTTTAATCTTGATTCCCTTGGTGAAGTATGTTCTTGTTGTTCTGTGGGCCAATGACGATGGTGAAGGTGGTACATTTGCATTGTACTCCTTGATTTGTCGTAATGCCAAGGTGAATCTTCTTCCCAATCAGTTACCATCAGATGCCCGAATATCAGGCTTTAGGCTAAAGGTGCCATCCGCTGAGCTCGAAAGGTCTATAAAAATTAAGGAGAGGCTAGAGGCTTCACTGACTCTGAAGAAGATTCTACTAGTATTAGTTCTTGCTGGCACTTCTATGGTGATAGCTAATGGGGTAGTTACACCAGCAATGTCAGTACTATCATCTGTTAATGGTTTGAAAGTTGGGGTAGATGCAATTAAGCAAGATGAAGTCGTGATGATTTCTGTTGCTTGCCTTGTCATTTTGTTCAGTGTACAGAAGTATGGAACCAGTAAAGTGGGGCTTGCTGTAGGACCTGCTTTGTTTATATGGTTTTGTTCTCTTGCGGGAATTCAACTAAAGCATGGTATTCTCTTGGGGGCTGTCTTCTGTGTGCAACTG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01776	442	2903	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0071805 potassium ion transmembrane transport

cellular_component
GO:0016020 membrane

molecular_function
GO:0015079 potassium ion transmembrane transporter activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001776s00029306.1	PF02705.11	K_trans	109	317	3.70E-58
Glyur001776s00029306.2	PF02705.11	K_trans	109	361	7.30E-74

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	7.822
SRR1783600	control	7.738
SRR1783602	moderate drought stress	6.901
SRR1811619	moderate drought stress	6.790

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	5.935
DRR006520	Root Summer glycyrrhizin high producing strain	6.107
DRR006521	Root Winter glycyrrhizin high producing strain	4.065
DRR006522	Root Winter glycyrrhizin high producing strain	3.923
DRR006523	Root Summer glycyrrhizin low producing strain	4.089
DRR006524	Root Summer glycyrrhizin low producing strain	4.304
DRR006525	Leaf Summer glycyrrhizin high producing strain	4.997
DRR006526	Leaf Summer glycyrrhizin high producing strain	4.905

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	11.738
SRR2868004	Drought Stress (root)	11.359
SRR2967015	Control (root)	12.714

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	3.821
SRR9715740	Leaf	3.725
SRR9715741	Leaf	3.693
SRR9715739	Root	1.122
SRR9715742	Root	6.158
SRR9715743	Root	4.965

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	2.654
SRR8749028	MeJA induced 9h	7.233
SRR8749029	MeJA induced 9h	1.467
SRR8749030	Uninduced	1.170
SRR8749031	Uninduced	2.219
SRR8749032	Uninduced	0.635

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	13.086
SRR8400027	Control - Root	10.751