Gene detail information of Glyur001773s00037786 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G05930.1 | 2.00E-69 | guanylyl cyclase 1 |
| NR | XP_004503213.1 | 7.30E-163 | PREDICTED: protein GUCD1-like isoform X1 [Cicer arietinum] |
| trEMBL | tr|K7MPM8|K7MPM8_SOYBN | 8.00E-160 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G03601.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01773 | 48399 | 58218 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001773s00037786.1 | PF09778.4 | Guanylate_cyc_2 | 55 | 267 | 8.20E-82 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.817 |
| SRR1783600 | control | 4.685 |
| SRR1783602 | moderate drought stress | 4.785 |
| SRR1811619 | moderate drought stress | 4.862 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.658 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.618 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.463 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 8.137 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.762 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.838 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.245 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.280 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.971 |
| SRR2868004 | Drought Stress (root) | 12.899 |
| SRR2967015 | Control (root) | 11.679 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.471 |
| SRR9715740 | Leaf | 4.996 |
| SRR9715741 | Leaf | 7.169 |
| SRR9715739 | Root | 1.900 |
| SRR9715742 | Root | 5.060 |
| SRR9715743 | Root | 4.274 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.118 |
| SRR8749028 | MeJA induced 9h | 10.701 |
| SRR8749029 | MeJA induced 9h | 5.759 |
| SRR8749030 | Uninduced | 35.523 |
| SRR8749031 | Uninduced | 43.593 |
| SRR8749032 | Uninduced | 19.605 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.340 |
| SRR8400027 | Control - Root | 12.521 |