Gene detail information of Glyur001772s00032256 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G55540.1 | 0 | tornado 1 |
| NR | XP_003530781.1 | 0 | PREDICTED: protein TORNADO 1-like [Glycine max] |
| Swissprot | tr|Q9FJ57|TRN1_ARATH | 0 | Protein TORNADO 1 |
| trEMBL | tr|I1KYG3|I1KYG3_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G43730.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01772 | 21037 | 25641 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.805 |
| SRR1783600 | control | 8.773 |
| SRR1783602 | moderate drought stress | 4.612 |
| SRR1811619 | moderate drought stress | 4.545 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.799 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.657 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.185 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.180 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.744 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.771 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.001 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.020 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.004 |
| SRR2868004 | Drought Stress (root) | 2.931 |
| SRR2967015 | Control (root) | 4.686 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.326 |
| SRR9715740 | Leaf | 0.755 |
| SRR9715741 | Leaf | 0.990 |
| SRR9715739 | Root | 1.230 |
| SRR9715742 | Root | 4.041 |
| SRR9715743 | Root | 3.042 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.707 |
| SRR8749028 | MeJA induced 9h | 2.791 |
| SRR8749029 | MeJA induced 9h | 1.816 |
| SRR8749030 | Uninduced | 0.547 |
| SRR8749031 | Uninduced | 0.269 |
| SRR8749032 | Uninduced | 0.176 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.679 |
| SRR8400027 | Control - Root | 12.463 |