Gene detail information of Glyur001766s00039215 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | ACU23565.1 | 5.06E-16 | unknown [Glycine max] |
| trEMBL | tr|C6TKX5|C6TKX5_SOYBN | 2.00E-16 | Putative uncharacterized protein {ECO:0000313|EMBL:ACU23565.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01766 | 31647 | 32195 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.083 |
| SRR1783600 | control | 3.181 |
| SRR1783602 | moderate drought stress | 4.424 |
| SRR1811619 | moderate drought stress | 5.208 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.477 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.380 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.905 |
| SRR2868004 | Drought Stress (root) | 21.601 |
| SRR2967015 | Control (root) | 46.837 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.990 |
| SRR9715740 | Leaf | 1.293 |
| SRR9715741 | Leaf | 2.506 |
| SRR9715739 | Root | 1.612 |
| SRR9715742 | Root | 1.119 |
| SRR9715743 | Root | 1.156 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 35.059 |
| SRR8749028 | MeJA induced 9h | 51.041 |
| SRR8749029 | MeJA induced 9h | 21.365 |
| SRR8749030 | Uninduced | 24.481 |
| SRR8749031 | Uninduced | 25.791 |
| SRR8749032 | Uninduced | 10.285 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 14.068 |
| SRR8400027 | Control - Root | 7.839 |